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  1. open-cravat open-cravat Public

    A modular annotation tool for genomic variants

    JavaScript 114 27

  2. 2020plus 2020plus Public

    Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests

    Python 49 17

  3. mhcnuggets mhcnuggets Public

    MHC Class I and Class II neoantigen binding prediction

    Python 26 10

  4. bigmhc bigmhc Public

    BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity

    Jupyter Notebook 45 9

  5. pictograph pictograph Public

    A Bayesian hierarchical model to build tumor evolutionary trees

    R 5

  6. open-cravat-dxapp open-cravat-dxapp Public

    open-cravat-dxapp

    Python

Repositories

Showing 10 of 41 repositories
  • KarchinLab/open-cravat-roadmap’s past year of commit activity
    0 0 8 0 Updated Oct 29, 2024
  • open-cravat Public

    A modular annotation tool for genomic variants

    KarchinLab/open-cravat’s past year of commit activity
    JavaScript 114 MIT 27 30 1 Updated Oct 29, 2024
  • KarchinLab/open-cravat-modules-karchinlab’s past year of commit activity
    JavaScript 0 MIT 6 1 2 Updated Oct 28, 2024
  • KarchinLab/open-cravat-readthedocs’s past year of commit activity
    Python 1 4 1 0 Updated Oct 25, 2024
  • pictograph Public

    A Bayesian hierarchical model to build tumor evolutionary trees

    KarchinLab/pictograph’s past year of commit activity
    R 5 0 5 1 Updated Oct 21, 2024
  • KarchinLab/open-cravat-extras’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 20, 2024
  • KarchinLab/oc_vignettes’s past year of commit activity
    JavaScript 0 0 0 0 Updated Sep 13, 2024
  • CHASMplus Public

    Predicts which missense mutations will drive growth of human cancers

    KarchinLab/CHASMplus’s past year of commit activity
    Python 11 3 1 1 Updated Aug 4, 2024
  • 2020plus Public

    Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests

    KarchinLab/2020plus’s past year of commit activity
    Python 49 Apache-2.0 17 11 1 Updated Aug 3, 2024
  • KarchinLab/open-cravat-multiuser’s past year of commit activity
    JavaScript 2 2 1 0 Updated Jun 25, 2024

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