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7 changes: 6 additions & 1 deletion _sources/lipyds.rst.txt
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Expand Up @@ -22,6 +22,11 @@ lipyds
Installation instructions
=========================

The latest version of lipyds can be installed using the following:

.. code-block:: bash
mamba install -c conda-forge lipyds
The source code of lipyds can be installed using the following:

Expand All @@ -32,7 +37,7 @@ The source code of lipyds can be installed using the following:
cd lipyds
python setup.py install
.. |lipyds_latest| image:: https://img.shields.io/badge/latest-unavailable-inactive.svg
.. |lipyds_latest| image:: https://img.shields.io/badge/latest-passed-green.svg
:alt: lipyds develop CI status
:target: https://github.com/MDAnalysis/MDAKits/actions

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2 changes: 1 addition & 1 deletion _sources/mdakits.rst.txt
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Expand Up @@ -328,7 +328,7 @@ Each of the MDAKits in the following table links to a page with more details abo
:alt: spyrmsdkit develop CI status
:target: https://github.com/MDAnalysis/MDAKits/actions

.. |lipyds_latest| image:: https://img.shields.io/badge/latest-unavailable-inactive.svg
.. |lipyds_latest| image:: https://img.shields.io/badge/latest-passed-green.svg
:alt: lipyds develop CI status
:target: https://github.com/MDAnalysis/MDAKits/actions

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6 changes: 5 additions & 1 deletion lipyds.html
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<div class="line-block">
<div class="line">* <a class="reference external" href="https://doi.org/10.1016/j.bbadva.2021.100010">https://doi.org/10.1016/j.bbadva.2021.100010</a></div>
</div>
<div class="line">🧪 <strong>Tests (latest):</strong> <a class="reference external" href="https://github.com/MDAnalysis/MDAKits/actions"><img alt="lipyds develop CI status" src="https://img.shields.io/badge/latest-unavailable-inactive.svg" /></a></div>
<div class="line">🧪 <strong>Tests (latest):</strong> <a class="reference external" href="https://github.com/MDAnalysis/MDAKits/actions"><img alt="lipyds develop CI status" src="https://img.shields.io/badge/latest-passed-green.svg" /></a></div>
<div class="line">🧪 <strong>Tests (develop):</strong> <a class="reference external" href="https://github.com/MDAnalysis/MDAKits/actions"><img alt="lipyds develop CI status" src="https://img.shields.io/badge/develop-passed-green.svg" /></a></div>
<div class="line"><strong>Description:</strong></div>
<div class="line"><em>A toolkit for leaflet-based membrane analysis.</em></div>
</div>
<section id="installation-instructions">
<h2>Installation instructions<a class="headerlink" href="#installation-instructions" title="Link to this heading"></a></h2>
<p>The latest version of lipyds can be installed using the following:</p>
<div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>mamba<span class="w"> </span>install<span class="w"> </span>-c<span class="w"> </span>conda-forge<span class="w"> </span>lipyds
</pre></div>
</div>
<p>The source code of lipyds can be installed using the following:</p>
<div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>mamba<span class="w"> </span>install<span class="w"> </span>-c<span class="w"> </span>conda-forge<span class="w"> </span>pyvista<span class="w"> </span>cython<span class="w"> </span>matplotlib<span class="w"> </span>nptyping<span class="w"> </span><span class="s2">&quot;numpy&gt;=1.20.0&quot;</span><span class="w"> </span>pandas<span class="w"> </span><span class="s2">&quot;scikit-learn&gt;=0.21.0&quot;</span><span class="w"> </span>scipy
git<span class="w"> </span>clone<span class="w"> </span>https://github.com/lilyminium/lipyds.git
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2 changes: 1 addition & 1 deletion mdakits.html
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Expand Up @@ -269,7 +269,7 @@ <h1>Registry of MDAnalysis Toolkits (MDAKits)<a class="headerlink" href="#regist
<tr class="row-odd"><td><p><a class="reference internal" href="lipyds.html#lipyds"><span class="std std-ref">lipyds</span></a></p></td>
<td><p>lipids, membranes</p></td>
<td><p>lilyminium</p></td>
<td><p><a class="reference external" href="https://github.com/MDAnalysis/MDAKits/actions"><img alt="lipyds develop CI status" src="https://img.shields.io/badge/latest-unavailable-inactive.svg" /></a> <a class="reference external" href="https://github.com/MDAnalysis/MDAKits/actions"><img alt="lipyds develop CI status" src="https://img.shields.io/badge/develop-passed-green.svg" /></a></p></td>
<td><p><a class="reference external" href="https://github.com/MDAnalysis/MDAKits/actions"><img alt="lipyds develop CI status" src="https://img.shields.io/badge/latest-passed-green.svg" /></a> <a class="reference external" href="https://github.com/MDAnalysis/MDAKits/actions"><img alt="lipyds develop CI status" src="https://img.shields.io/badge/develop-passed-green.svg" /></a></p></td>
</tr>
<tr class="row-even"><td><p><a class="reference internal" href="propkatraj.html#propkatraj"><span class="std std-ref">propkatraj</span></a></p></td>
<td><p>pKa, protein</p></td>
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