mkdocs.yml

site_name: Nextflow Gotchas
site_description: A collection of unexpected challenges and learnings with nextflow and nf-core.
site_author: Moritz E. Beber
site_url: https://midnighter.github.io/nextflow-gotchas

markdown_extensions:
  - admonition
  - footnotes
  - toc:
      permalink: true
  - pymdownx.highlight:
      anchor_linenums: true
  - pymdownx.inlinehilite
  - pymdownx.snippets:
      base_path:
        - examples
      check_paths: true
  - pymdownx.superfences
  - pymdownx.emoji:
      emoji_index: !!python/name:materialx.emoji.twemoji
      emoji_generator: !!python/name:materialx.emoji.to_svg

theme:
  features:
    - content.code.annotate
    - navigation.instant
    - navigation.top
  name: material
  palette:
    - media: "(prefers-color-scheme: light)"
      scheme: default
      primary: green
      accent: light green
      toggle:
        icon: material/weather-night
        name: Switch to dark mode
    - media: "(prefers-color-scheme: dark)"
      scheme: slate
      primary: green
      accent: light green
      toggle:
        icon: material/weather-sunny
        name: Switch to light mode

extra:
  social:
    - icon: fontawesome/brands/slack
      link: https://join.slack.com/t/nextflow/shared_invite/zt-11iwlxtw5-R6SNBpVksOJAx5sPOXNrZg
      name: Join the nextflow Slack
    - icon: fontawesome/brands/slack
      link: https://nfcore.slack.com/
      name: Join the nf-core Slack
    - icon: fontawesome/brands/github
      link: https://github.com/Midnighter
      name: Moritz on GitHub
    - icon: fontawesome/brands/twitter
      link: https://twitter.com/me_beber
      name: Moritz on Twitter
    - icon: fontawesome/brands/linkedin
      link: https://www.linkedin.com/in/moritz-beber-b597a55a/
      name: Moritz on LinkedIn
    - icon: fontawesome/brands/orcid
      link: https://orcid.org/0000-0003-2406-1978
      name: Moritz on LinkedIn

copyright: Copyright &copy 2022, Moritz E. Beber.

repo_url: https://github.com/Midnighter/nextflow-gotchas
repo_name: Midnighter/nextflow-gotchas

watch:
  - examples