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update biomass with pigments and carbohydrates #147
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pulling main to dev
Update setup.py
Changes to support template biomass
import fix
biomass fix
updated ML and scikit-learn version
minor fixes
fixed builder to detect biomass added compounds
notebook update
biomass update
remove annotate_proteins_kmer_v1
minor fix
Created Weighting function for gap fill. Example data needed for testing function.
Major speed increase for the omics weighting function and edge case bug fix.
Fix RAST parsing
bumped to version 0.4.0
do not pull to main |
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made update to MSTemplate. Unsure if i am doing this PR correctly