updated to python wget and renamed github action control file

.github/workflows/ci_uint_tests.yaml

@@ -0,0 +1,62 @@
+name: CI Unit Tests
+on: [pull_request, workflow_dispatch]
+
+jobs:
+
+  ci_pytest:
+      runs-on: ubuntu-latest
+      name: Run unit tests on CI system      
+      permissions:
+        checks: write
+
+      steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: 3.10+
+
+      - name: Install dependencies
+        run: |
+          sudo apt-get update
+          sudo apt-get install -y perl libxml-libxml-perl libxml-libxslt-perl libdatetime-perl
+          python -m pip install --upgrade pip
+          pip install pytest 7.2.1
+          pip install wxflow 0.2.0
+          pip install wget
+
+      - name: Cache Rocoto Install
+        uses: actions/cache@v4
+        with:
+          path: ~/rocoto
+          key: ${{ runner.os }}-rocoto-${{ hashFiles('**/ci-unit_tests.yaml') }}
+
+      - name: Install Rocoto
+        run: |
+          if [ ! -d "$HOME/rocoto/bin" ]; then
+            git clone https://github.com/christopherwharrop/rocoto.git $HOME/rocoto
+            cd $HOME/rocoto
+            ./INSTALL
+          fi
+          echo "$HOME/rocoto/bin" >> $GITHUB_PATH
+
+      - name: Run tests
+        shell: bash
+        run: |
+          sudo mkdir -p /work/noaa
+          cd $GITHUB_WORKSPACE/sorc/wxflow
+          git submodule update --init
+          cd $GITHUB_WORKSPACE/sorc
+          ./link_workflow.sh
+          cd $GITHUB_WORKSPACE/ci/scripts/tests
+          pytest -v --junitxml $GITHUB_WORKSPACE/ci/scripts/tests/test-results.xml
+
+      - name: Publish Test Results
+        if: always()
+        uses: EnricoMi/publish-unit-test-result-action@v2
+        with:
+          files: ci/scripts/tests/test-results.xml
+          job_summary: true
+          comment_mode: off

ci/scripts/tests/test_rocotostat.py

@@ -1,6 +1,7 @@
 import sys
 import os
 from shutil import rmtree
+import wget
 
 script_dir = os.path.dirname(os.path.abspath(__file__))
 sys.path.append(os.path.join(os.path.dirname(script_dir), 'utils'))
@@ -13,12 +14,15 @@
 testdata_path = 'testdata/rocotostat'
 testdata_full_path = os.path.join(script_dir, testdata_path)
 
-wget = which('wget')
+
 if not os.path.isfile(os.path.join(testdata_full_path, 'database.db')):
-    wget.add_default_arg([
-        '-P', testdata_full_path, test_data_url + str(testdata_path) + '/workflow.xml',
-        test_data_url + str(testdata_path) + '/database.db'])
-    wget()
+    workflow_url = test_data_url + str(testdata_path) + '/workflow.xml'
+    workflow_destination = os.path.join(testdata_full_path, 'workflow.xml')
+    wget.download(workflow_url, workflow_destination)
+
+    database_url = test_data_url + str(testdata_path) + '/database.db'
+    database_destination = os.path.join(testdata_full_path, 'database.db')
+    wget.download(database_url, database_destination)
 
 try:
     rocotostat = which('rocotostat')
@@ -63,12 +67,15 @@ def test_rocoto_stalled():
     xml = os.path.join(testdata_full_path, 'stalled.xml')
     db = os.path.join(testdata_full_path, 'stalled.db')
 
-    wget = which('wget')
     if not os.path.isfile(os.path.join(testdata_full_path, 'stalled.db')):
-        wget.add_default_arg([
-            '-P', testdata_full_path, test_data_url + str(testdata_path) + '/stalled.xml',
-            test_data_url + str(testdata_path) + '/stalled.db'])
-        wget()
+        workflow_url = test_data_url + str(testdata_path) + '/stalled.xml'
+        database_url = test_data_url + str(testdata_path) + '/stalled.db'
+
+        workflow_destination = os.path.join(testdata_full_path, 'stalled.xml')
+        wget.download(workflow_url, workflow_destination)
+
+        database_destination = os.path.join(testdata_full_path, 'stalled.db')
+        wget.download(database_url, database_destination)
 
     rocotostat = which('rocotostat')
     rocotostat.add_default_arg(['-w', xml, '-d', db])