Releases: NOAA-GFDL/FRE-NCtools
Releases · NOAA-GFDL/FRE-NCtools
2024.04
What's Changed
- Fix index error and incorrect vector input in setup_bilinear_interp by @mlee03 in #301
- fregrid_acc - first and second order conservative interpolation by @mlee03 in #300
- add m4 check for openacc flags and fix for intel by @rem1776 in #305
- Update CI image by @rem1776 in #306
- fregrid_acc - convert 2d lon/lat_vertices arrays to 1d arrays by @mlee03 in #308
- update deprecated
upload-artifact
action version by @rem1776 in #309 - Fix time_average for instantaneous output by @uramirez8707 in #310
- Update mppnccombine.c by @HansVahlenkamp in #314
- Let split_ncvars split large Netcdf-4 files by @ceblanton in #312
- Update configure.ac to new tag 2024.04 by @ceblanton in #316
New Contributors
- @HansVahlenkamp made their first contribution in #314
Full Changelog: 2024.03...2024.04
2024.03
What's Changed
- Change split_ncvars.pl regex to work for dimensionless variables by @ceblanton in #298
- Change split_ncvars.pl regex to work for both dimensionless and with-dimensions by @ceblanton in #299
- Add ncrc6 env.sh to load C6 modules by @ceblanton in #303
- Add sync calls before any netcdf files are closed and add error checking by @rem1776 in #304
Full Changelog: 2024.02...2024.03
2024.02
What's Changed
- Adjust the size of MAXXGRID for serial/non-mpi builds by @underwoo in #291
- Do not write time_avg_info variable attribute in fregrid by @uramirez8707 in #294
- Additional option "on_grid" for make_topog by @ThomasNeumann2 in #292
- Update package version to 2024.02 by @ceblanton in #295
New Contributors
- @ThomasNeumann2 made their first contribution in #292
Full Changelog: 2024.01...2024.02
2024.01
What's Changed
- remove gitlab references from contribution guide by @rem1776 in #271
- Added fix for blocking factor of 0 in mppnccombine by @0cole in #275
- Remove the use of average_* variables and use time_bnds variables instead by @uramirez8707 in #278
- Fix issue when getting the deflate lelvel of the input netcdf file by @uramirez8707 in #285
- #1 Add OpenACC compile option to autotools by @mlee03 in #282
- Update configure.ac to reflect release 2024.01 by @ceblanton in #287
New Contributors
- @0cole made their first contribution in #275
- @uramirez8707 made their first contribution in #278
Full Changelog: 2023.01.02...2024.01
2023.01.02
What's Changed
- Fix for fregrid to properly sets NC4 compression by @ceblanton in #258
- NCTools documentation update for 2023.02 by @ngs333 in #264
- Update autoconf package verison to 2023.01.02 by @ceblanton in #268
Full Changelog: 2023.01.01...2023.01.02
2023.01.01
What's Changed
- Include 4-dimensional (i.e. diurnal) output in default split-vars processing by @ceblanton in #242
Full Changelog: 2023.01...2023.01.01
2023.01
What's Changed
- fregrid to allow bilinear inpterpolation of vector fields. by @ngs333 in #215
- Code for changing poly_area by rotating polar polygons away from pole. by @ngs333 in #209
- Improvements to affinity.c by @ngs333 in #219
- Remove the ocean_model_grid_generator subproject. by @ngs333 in #223
- Changed to use run_and_check function (found in test_utils.bash) in by @ngs333 in #206
- configure.ac was modified for release 2023.01. by @ngs333 in #228
- Updated GFDL site configuration files by @ceblanton in #229
- Update gfdl site config files by @ceblanton in #231
Full Changelog: 2022.02...2023.01
2022.02
What's Changed
- Turn off gitlab CI artifacts by @ceblanton in #178
- iargc replacement in Fortran apps. by @ngs333 in #188
- Fix fregrid conserve2 issues for stretched grids by @nikizadehgfdl in #185
- Fixing test_utils.bash to be POSIX safe by @ilaflott in #189
- Documentation changes and addition for NCTools v 2022.02 by @ngs333 in #190
- Fix to runoff_regrid.c by @ilaflott in #192
- Remove shared global vars npes, pe, root_pe by @underwoo in #183
- Completing the do_cube_transform implementation in make_hgrid v2.0 by @ngs333 in #195
- Modified configure.ac file for release 2022.02 by @ngs333 in #197
New Contributors
Full Changelog: 2022.01...2022.02
2022.01
Features
- Added the Ocean Model Grid Generator (as a submodule), a tool for creating tripolar grids for GFDL's MOM-based ocean models. See
ocean_grid_generator.py --help
for usage help, and https://github.com/NOAA-GFDL/ocean_model_grid_generator for usage examples and documentation. - Improved
make_hgrid
algorithm to create supergrids from internal FV3 grid files mppnccombine
can now combine very large grids (size > 2^31 cells)- For GFDL sites (gfdl, gfdl-ws, ncrc4, ncrc5), switched to GCC compiler from Intel. GCC is more universally used and has better support for increasingly heterogeneous hardware.
make_hgrid
suggests latitudes for creating stretched grids with both poles as grid points (to help avoid tiling errors and incorrect land mask when using other tools such asmake_coupler_mosaic
)
Minor updates
- Build system (automake) updates
- More updates for C99 compliance and for compilation with latest compiler versions.
- fregrid will warn if requested field cannot be passed through (i.e. fields without spatial dimension)
What's Changed
- ocean_model_grid_generator submodule to NCTools by @ngs333 in #115
- Resolving some spurious repo differences between gitlab and github by @ceblanton in #120
- WIP: Updates for GFDL gitlab CI by @ceblanton in #123
- Testing script and CI updates by @rem1776 in #104
- Supergrids from internal FV3 grids. by @ngs333 in #118
- Two test updates that didn't make it in #104 by @ceblanton in #124
- Notification when field data is not written to output file. by @ngs333 in #125
- Disable the optimized Intel Math Library for PP/AN and WS compilations by @ceblanton in #130
- Writing uniform provenance info in netdfs global attributes. by @ngs333 in #129
- mppnccombine fixes for use with monolithic files by @ngs333 in #138
- Updates build system to use correct -I and -L for Fortran files by @thomas-robinson in #141
- Remove deprecated function use in lx_find_mpi.m4 by @underwoo in #121
- Additional changes to build with recent c99 compliant compilers. by @ngs333 in #145
- build: add _Generic selection test to autoconf by @underwoo in #146
- make_simple_hydrog.csh and unit test data links. by @ngs333 in #148
- Ocean grid model.subproject by @underwoo in #122
- Update of Readme.md - 2022.1 by @ngs333 in #150
- README.md for 2022.1 - 2nd attempt. by @ngs333 in #151
- Minor changes to remove two newer compiler warnings by @ngs333 in #154
- Remove deprecated split_ncvars.csh and split_ncvars.py scripts by @ceblanton in #157
- Update GFDL compiler settings from Intel to GCC by @ceblanton in #153
- Remove unneeded tool combine-lumip-vars.py by @ceblanton in #163
- Remove LD_RUN_PATH env var from GFDL site files by @ceblanton in #161
- Changed configure.ac to show code_release_version as 2022.01 by @ngs333 in #160
- Suggest target latitudes so that stretched grid would have both NS poles by @nikizadehgfdl in #159
- Revert "Suggest target latitudes so that stretched grid would have both NS poles" by @ngs333 in #167
- Update omgg submodule that includes fix for installing virtual python by @ceblanton in #166
- Updates for deploying updates for GFDL sites by @ceblanton in #168
- Rpath for netcdf libs by @ngs333 in #164
- Test stretch fregrid by @LuisSalbey in #68
- Suggest target latitudes so that stretched grid would have both NS poles by @nikizadehgfdl in #169
- Add config.site and env.sh files for NCRC5 site by @ceblanton in #171
New Contributors
- @LuisSalbey made their first contribution in #68
Full Changelog: v2.19.1...2022.01
v2.19.1
What's Changed
- Basic github action for CI by @rem1776 in #10
- Nc null char by @thomas-robinson in #9
- Fixes build issue for nc_null_check Makefile.am by @thomas-robinson in #11
- Adding some documentation concerning building and running executable… by @ngs333 in #2
- Improvements for CI and workaround for test by @rem1776 in #15
- Bring in last updates from GFDL's gitlab, fixed by @ceblanton in #16
- Simple hydrog file arrange by @underwoo in #22
- Small update to gaea config files by @ceblanton in #28
- Improved ax_lib_netcdf.m4 by @underwoo in #23
- Updates for C99 standards compliance by @underwoo in #26
- Grid generation: multiple nest capability by @A-Kyle in #27
- Added editorconfig file to repository by @underwoo in #32
- CI container update and fix for log files by @rem1776 in #34
- Copyright by @ngs333 in #43
- Fix poly_area when side of grid cell polygon crosses pole by @nikizadehgfdl in #60
- Fix clip 2dx2d cells include poles by @nikizadehgfdl in #59
- Use ATM grid for ATMxLND if ATM and LND grids are the same by @nikizadehgfdl in #58
- Change container to a new ubuntu focal version to fix CI by @rem1776 in #64
- New env.sh site files with updated gcc by @ceblanton in #65
- Enable telescoping nests (multiple levels) by @JosephMouallem in #63
- Add prepend-, append- and remove-path subcommands to env.sh scripts by @underwoo in #66
- Test.updates by @underwoo in #73
- Small fixes for GFDL gitlab CI by @ceblanton in #78
- Remove combine_restarts by @ceblanton in #80
- Remove combine_blobs by @ceblanton in #79
- Updated build instructions for GFDL sites using "eval
env.sh
" usage by @ceblanton in #77 - Add env.sh for NESCC by @underwoo in #85
- Update orion env.sh to use newer GCC by @underwoo in #86
- Set the executable rpath to include needed netcdf libraries by @ceblanton in #88
- Make hgrid combo by @ngs333 in #94
- Update split_ncvar.pl shebang header to use first perl found in user's PATH by @ceblanton in #93
- Bring back combine_restarts and add icebergs by @ceblanton in #95
- iceberg_comb.sh to check for required tool ncdump by @ceblanton in #97
- Remap land newdata by @ngs333 in #81
- Compiler flags to for release 18.1 - running on AMD and Intel by @ngs333 in #101
- Update to gitlab CI config file to load site env.sh properly by @ceblanton in #98
- Updated README with note on C99 standards support required of compiler. by @ngs333 in #103
- Use input_file format for the output NetCDF file type if the format argument is not specified by @ngs333 in #107
- Update to use RHEL/CentOS 7 Spack modulefiles for GFDL PP/AN site by @ceblanton in #111
New Contributors
- @A-Kyle made their first contribution in #27
- @JosephMouallem made their first contribution in #63
Full Changelog: v2.18.0.1...v2.19.1