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For release 2024.09.00#50

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fmalatino merged 215 commits intomainNOAA-GFDL/NDSL:mainfrom developNOAA-GFDL/NDSL:developCopy head branch name to clipboardSep 30, 2024

+3,738-332

Commits

Commits on Apr 18, 2024

• Updating setup.py to reflect version number

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• Merge pull request #37 from NOAA-GFDL/hotfix/version_num

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  FlorianDeconinck

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Commits on Apr 24, 2024

• Update to mypy 1.4.1

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• Merge pull request #38 from NOAA-GFDL/update/mypy_1.4.1

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Commits on May 10, 2024

• Update to DaCe fixing parsing issue when using python 3.11.x

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• Merge branch 'develop' into update/dace

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Commits on May 14, 2024

• Basic boilerplate + utset

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• lint

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• Add pytest-cov, configure

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• lint

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• Swap pytest-cov for raw usage of coverage which allows for better paralle process

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• lint

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• Better source coverage

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• Updating submodules

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Commits on May 15, 2024

• Updated quantity.py to use dsl type Float where needed

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• Added use of 'Float' dsl type where needed in allocator.py

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Commits on May 16, 2024

• Updating gt4py and casting of float types to Float dsl type where needed in geometry.py and helper.py

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Commits on May 17, 2024

• Pull down pyFV3 & pySHiELD configuration that shouldn't be there.

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• Add serialbox to netcdf as a tool of ndsl

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• Linting

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• Rename --layout to --topology

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Commits on May 18, 2024

• Updating gt4py

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• Testing for pyFV3

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Commits on May 20, 2024

• Adjust naming & verbose choice for private generic function

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• Lint

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• Merge pull request #40 from NOAA-GFDL/feature/pytest_code_coverage

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• Merge branch 'develop' into feature/boilerplate

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• Merge pull request #39 from NOAA-GFDL/feature/boilerplate

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• Updated gt4py to latest version

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• Merge branch 'develop' into update/dace

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• Merge branch 'develop' into fix/float_precision

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• Updated setup.py to reflect actual version number

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Commits on May 21, 2024

• Updating gt4py

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• Merge branch 'develop' into update/dace

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• Merge pull request #43 from fmalatino/update/dace

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• Merge branch 'develop' into fix/float_precision

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Commits on May 30, 2024

• Removed commented Float import in ndsl/quantity.py

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Commits on May 31, 2024

• Readding tutorial notebooks based off NDSL develop branch

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• Removed comment in quantity regarding pace issue 3

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• Merge branch 'develop' into feature/centralize_translate_test

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• Merge pull request #45 from NOAA-GFDL/feature/centralize_translate_test

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Commits on Jun 3, 2024

• Added Fortran serialization notebooks

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• Merge branch 'develop' into fix/float_precision for PR 45 changes

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• Local linting

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• Merge branch 'develop' into feature/NDSL_tutorial

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• Merge pull request #48 from NOAA-GFDL/feature/NDSL_tutorial

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• Merge branch 'develop' into fix/float_precision with changes from PR 48

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• Merge pull request #44 from fmalatino/fix/float_precision

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• Updated version to 2024.06.00

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Commits on Jun 4, 2024

• Merge pull request #49 from fmalatino/develop

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Commits on Jun 5, 2024

• try test

  

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• submodule woes

  

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• test parallel

  

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Commits on Jun 7, 2024

• Changed conditional statement to check for compute option in test_translate.py

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• Linting

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• Updating submodules

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Commits on Jun 11, 2024

• Updating dace

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• trigger ci

  

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• Changed get_communicator conditional to check for cubed-sphere

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Commits on Jun 12, 2024

• attempt 1

  

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• Changed get_communicator topology selection conditional

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• Changed mysign in fill_corners_dgrid_def to external variable

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• Linting

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Commits on Jun 13, 2024

• Rolling back dace and gt4py

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• Removing mysign from axis_offsets

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• Cast parameters in Translate test to proper float precision

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• Merge pull request #55 from NOAA-GFDL/fix/missing_Float_cast_translate_parameters

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• test

  

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• Update fv3_tests.yaml

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• Update fv3_tests.yaml

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• test

  

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Commits on Jun 14, 2024

• When building a default Grid, do not pass adjusted npx/npy

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• Merge pull request #56 from NOAA-GFDL/fix/bad_grid_dim_on_default

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Commits on Jun 20, 2024

• fix action name

  

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• UNTRACKED FILE

  

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• Merge branch 'develop' into fix/computegridoption

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• Merge pull request #53 from fmalatino/fix/computegridoption

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• Merge branch 'main' into develop

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• Pinning numpy version in setup.py

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• Removed python 3.8.12 from testing matrix

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• Merge branch 'develop' into ci-testing

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• Updating lint workflow to use python 3.11.7

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• Changed action/checkout to version 4

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• Re-pinning numpy

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• Pinned other requirements

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• Only pinning what needs to be pinned

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Commits on Jun 21, 2024

• Removing call to pip list from unit_tests.yaml

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• Merge pull request #57 from fmalatino/fix/numpy

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• add shield trigger

  

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• crrect trigger

  

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Commits on Jun 23, 2024

• add pace tests

  

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• change name

  

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Commits on Jun 24, 2024

• Merge remote-tracking branch 'mkl/reusing_workflows' into ci-testing

  

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• reusable workflows

  

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• Merge remote-tracking branch 'mkl/ci-testing' into ci-testing

  

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Commits on Jun 27, 2024

• Merge remote-tracking branch 'origin/develop' into ci-testing

  

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Commits on Jun 28, 2024

• Reverting changes to use of mysign in corners.py

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• Merge pull request #59 from fmalatino/fix/mysign

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Commits on Jul 1, 2024

• test

  

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Commits on Jul 2, 2024

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Commits on Jul 11, 2024

• Merge pull request #51 from mlee03/ci-testing

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Commits on Jul 30, 2024

• fix the mysign symbol bug in python 3.11

  

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Commits on Jul 31, 2024

• Make sure the netCDF reflects the Fortran type as saved

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Commits on Aug 1, 2024

• Merge pull request #61 from FlorianDeconinck/fix/serialbox_to_netcdf

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• Attempt to quantify noise (non-binding)

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• Merge pull request #60 from xyuan/xyuan/fix

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Commits on Aug 2, 2024

• Fix typo in print statement (FORWARD example)

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Commits on Aug 5, 2024

• Merge pull request #62 from NOAA-GFDL/fix/typo-in-gt4py-basic-example

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Commits on Aug 6, 2024

• NDSL examples: clear output from notebooks

  

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• Fix typos in boilerplate doc strings

  

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• Improved NDSL examples

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• Move plotting (at level k) to quantity class

  

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• Remove executable flag on GT4Py example notebook

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• Better error when missing data from the netCDF

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Commits on Aug 7, 2024

• Merge pull request #63 from romanc/feature/better-docs-for-ndsl-examples

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Commits on Aug 20, 2024

• Added conditional to MetricTerms init to allow for metric term generation for surface level (no eta_file specified)

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Commits on Aug 21, 2024

• Support for pbl scheme (#66)

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Commits on Aug 22, 2024

• Changes to support testing in pace for eta file specification

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• Merge branch 'develop' into feature/no_eta

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Commits on Aug 23, 2024

• Multi modal float metric (see comparison.py)

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Commits on Aug 27, 2024

• Clamp f32 to 1e-10

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• Moved test_eta.py from pace/tests/main/grid into NDSL/tests/grid, added eta_file generator script for testing

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• Merge branch 'feature/no_eta' of github.com:fmalatino/NDSL into feature/no_eta

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• Amending unit_tests.yaml to reflect addition of tests/grid/test_eta.py

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• Merge branch 'develop' into feature/translate_test_f32

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• Amending file path for test_eta.py

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• Another attempt to get the workflow to generate the test eta_files

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• Linting

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Commits on Aug 28, 2024

• Fix compare_to_numpy use of metric

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• Fix success message

  

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• adding block merging to netcdf conversion

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Commits on Aug 29, 2024

• Use of f-string in ValueError statement of _load_ak_bk_from_file

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• Amending pytest.fail statement in test_eta.py

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• bigfix

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Commits on Aug 30, 2024

• Amended generation.py to define hybrid pressure variables appropriately

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• bug

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• uninspiring revelation

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Commits on Sep 3, 2024

• lint

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• Merge branch 'feature/merge_savepoints' of github.com:oelbert/NDSL into feature/merge_savepoints

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• removing dead code

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• revert externals

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• Merge pull request #68 from oelbert/feature/merge_savepoints

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• Merge branch 'develop' into feature/translate_test_f32

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Commits on Sep 4, 2024

• Move all thresholds to class variable

  

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• Merge remote-tracking branch 'NOAA/feature/translate_test_f32' into feature/translate_test_f32

  

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• Merge pull request #67 from NOAA-GFDL/feature/translate_test_f32

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• Non-ideal fix for unreachable scalar variables, specifically in stencils/corners.py::fill_corners_dgrid_defn

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Commits on Sep 5, 2024

• Amended test_eta.py docstrings to reflect updated testing methods and eta_file variable in generation.py to use an empty string in conditional statement for hybrid pressure generation

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• Merge branch 'develop' into feature/no_eta

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• Amended method fill_corners_dgrid_defn to use x_out = x_out instead of x_out = x_in

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• fix compute 0 errors

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• oops

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• found the culprit

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Commits on Sep 6, 2024

• Merge pull request #74 from oelbert/hotfix/legacy_metric

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• Merge branch 'develop' into feature/no_eta

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• Linting

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  committed
  3649691

Commits on Sep 9, 2024

• Merge branch 'develop' into fix/x_in_x_out

  FlorianDeconinck

  authored
  7e1a16d

• Merge pull request #69 from fmalatino/fix/x_in_x_out

  Show description for 1773365
  FlorianDeconinck

  authored
  1773365

• hotfix to handle bool in serialized test data

  oelbert

  committed
  85ebd24

• Merge pull request #75 from oelbert/hotfix/bool_test

  Show description for 4ff66a9
  fmalatino

  authored
  4ff66a9

Commits on Sep 12, 2024

• Merge branch 'develop' into feature/no_eta

  fmalatino

  authored
  1102b75

• Amended generation.py to set default eta_file to None

  fmalatino

  committed
  1318b56

• Merged most recent changes of NDSL as of 12 Sept 2024

  fmalatino

  committed
  49ebd43

• Changed type hinting of eta_file in generation.py to reflect optional aspect

  fmalatino

  committed
  a1010dd

Commits on Sep 13, 2024

• Updates to submodules and version number

  fmalatino

  committed
  b87b0cb

• Merge branch 'develop' into update/subrepos

  fmalatino

  authored
  3a9852c

• Merge pull request #76 from fmalatino/update/subrepos

  Show description for c355e85
  fmalatino

  authored
  c355e85

Commits on Sep 16, 2024

• Merge branch 'develop' into feature/no_eta

  fmalatino

  authored
  069f056

• Merge pull request #65 from fmalatino/feature/no_eta

  Show description for 4a4c0c8
  fmalatino

  authored
  4a4c0c8

Commits on Sep 26, 2024

• Translate: print only ~10 errors and dump all data in files under .translate-errors

  

  Florian Deconinck

  committed
  8a719ef

Commits on Sep 30, 2024

• Merge pull request #77 from FlorianDeconinck/qol/translate_report

  Show description for a667d29
  FlorianDeconinck

  authored
  a667d29