Fully Integrate SCDL into Geneformer #828
Workflow file for this run
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| name: Install internal tools Python packages & run test suite | |
| on: | |
| pull_request: | |
| branches: [main] | |
| push: | |
| branches: [main] | |
| merge_group: | |
| types: [checks_requested] | |
| jobs: | |
| infra-bionemo: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: 'recursive' | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| cache: 'pip' | |
| - run: pip install -r requirements-dev.txt -r requirements-test.txt | |
| - run: pip install internal/infra-bionemo | |
| - run: cd internal/infra-bionemo && pytest -v --cov=infra_bionemo --cov-report=term . |