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Nance Lab

Home to all projects and repositories from the Nance Lab at the University of Washington. (PI: Elizabeth Nance)

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  1. diff_classifier diff_classifier Public

    This project aims to take existing analyses of nanoparticle diffusion that I have worked on previously and expand the analysis to additional features.

    Python 4 15

  2. ifmodels ifmodels Public

    Package for

    Jupyter Notebook 2 2

  3. fiberf fiberf Public

    Skeleton repository for our FFIBER method applied to immunohistochemistry slices from the ferret.

    Python 2

  4. textile textile Public

    Nance Lab Data Science in the Biological Sciences GitHub Repository for Modules and Activities

    Jupyter Notebook 2 4

  5. pytrackmate pytrackmate Public

    Python code to automate running the Trackmate plugin from ImageJ

    Python 2 1

  6. vampire_open vampire_open Public

    Forked from kukionfr/VAMPIRE_open

    open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition

    Python 1

Repositories

Showing 10 of 23 repositories
  • R_stats Public

    Scripts for running stats in R

    Nance-Lab/R_stats’s past year of commit activity
    R 0 0 0 0 Updated Oct 17, 2024
  • diff_classifier Public

    This project aims to take existing analyses of nanoparticle diffusion that I have worked on previously and expand the analysis to additional features.

    Nance-Lab/diff_classifier’s past year of commit activity
    Python 4 MIT 15 4 3 Updated Jun 18, 2024
  • diff_predictor Public

    Repository for diff_predictor, a software package for Machine Learning predictions of nanoparticle diffusion data

    Nance-Lab/diff_predictor’s past year of commit activity
    Jupyter Notebook 1 MIT 0 12 1 Updated May 24, 2024
  • pytrackmate Public

    Python code to automate running the Trackmate plugin from ImageJ

    Nance-Lab/pytrackmate’s past year of commit activity
    Python 2 MIT 1 1 0 Updated May 5, 2024
  • diff_visualizer Public

    Package for efficiently and reproducibly creating data visualizations for nanoparticle diffusion data

    Nance-Lab/diff_visualizer’s past year of commit activity
    Jupyter Notebook 1 MIT 0 8 0 Updated Apr 23, 2024
  • prevampire Public Forked from onoderamia/prevampire

    Supplementary Package to Apply to existing VAMPIRE package pipeline.

    Nance-Lab/prevampire’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Feb 28, 2024
  • cellmorphflows Public

    A repository for jupyter notebook workflows for experimentalists to prep their data for the VAMPIRE morphology modeling.

    Nance-Lab/cellmorphflows’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jan 17, 2024
  • MPT-database Public
    Nance-Lab/MPT-database’s past year of commit activity
    Python 1 1 0 0 Updated Nov 28, 2023
  • textile Public

    Nance Lab Data Science in the Biological Sciences GitHub Repository for Modules and Activities

    Nance-Lab/textile’s past year of commit activity
    Jupyter Notebook 2 MIT 4 1 4 Updated Jul 6, 2023
  • microFIBER Public

    Respository for the microFIBER paper and all analysis pipeliens

    Nance-Lab/microFIBER’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated May 18, 2022
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