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Releases: PNNL-Comp-Mass-Spec/MASIC

Release 3.2.8286

09 Sep 04:44
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.8152.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes

  • Updated OxyDataPlotter that fixes plot legend reference bugs
  • Improved spectrum cache initialization logic

Release 3.2.8152

27 Apr 23:49
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.8152.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes

  • Add 18-plex TMT (aka TMT18)
  • Preferentially use a tab when parsing custom SIC detail lists loaded from a parameter file
  • Add option to include custom SIC comments as an additional column in the _SICStats.txt file
  • Update to OxyPlot 2.1
  • Update PRISM.dll, PRISMDatabaseUtils.dll, InterDetect.dll, and MSDataFileReader.dll

Release 3.2.8053

19 Jan 02:05
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.8053.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes

  • Improvements when pasting a list of custom m/z values into the GUI
    • Auto-determine the column delimiter
    • Allow for 4-column format: m/z, m/z tolerance, scan or time, and comment
  • Allow for entering decimal values for the initial peak width scaler
  • Fix bug in the GUI that failed to track hidden settings loaded from a parameter file

Release 3.2.8042

08 Jan 02:05
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.8042.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes

  • Add option (enabled by default) to copy reporter ion intensities from MS3 spectra to MS2 spectra if the intensities in the MS3 spectra have a larger median value
  • Add column ParentScan to the _ReporterIons.txt file

Release 3.2.8006

04 Dec 01:08
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.8006.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes

  • New ThermoRawFileReader
    • Uses ThermoFisher.CommonCore.RawFileReader.dll v5.0.0.71

Release 3.2.7982

08 Nov 23:02
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.7982.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes:

  • Update URLs that reference example parameter files

Release 3.2.7901

19 Aug 18:48
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.7901.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes:

  • Fix bug with 16-plex TMT isotopic abundance correction coefficients
    • Inaccurate coefficients were defined for ions 12-16
    • See changes in commit ea66cf9
  • Remove unused COM reference to MSFileReaderLib

Release 3.2.7762

03 Apr 00:29
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.7762.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes:

  • Compute reporter ion observation rates and total intensity by reporter ion channel
  • Generate peak area and peak width histograms
    • Supports both OxyPlot and Python plotting with matplotlib
  • Create box and whisker plots showing the distribution of reporter ion intensities, by channel
  • Add option /CreateParamFile for creating an example parameter file
  • Optionally create an index.html file for viewing plots in a table

Release 3.2.7465

09 Jun 23:09
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.2.7465, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes:

  • Significant speed improvements by optimizing the in-memory spectra pool
  • Use GetColumnValue when reading a custom SIC list file

Release 3.1.7426

01 May 17:44
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On Windows, download MASIC_Installer.zip then extract and run MASIC_Installer.exe
to install to C:\Program Files\MASIC

Alternatively, download MASIC_v3.1.7426.zip, which has the application executable,
required DLLs, and example input and output files.

MASIC_Console_Program.zip contains a console version of MASIC that is both Windows and Linux compatible.
On Linux, use Mono to run the program, for example mono MASIC_Console.exe

Changes:

  • Convert to C#
  • Shorten the time required to load large _SICs.xml files into MASIC_Browser