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Alterations to DMS-related functions after PostgreSQL was adopted #43

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merged 9 commits into from
Aug 14, 2024

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Ben-Drucker
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The following functions have been tested (so far, only on macOS):

  • is_PNNL_DMS_connection_successful
  • get_output_folder_for_job_and_tool
  • get_dms_job_records
  • get_output_folder_for_job_and_tool
  • get_job_records_by_dataset_package
  • get_datasets_by_data_package
  • path_to_FASTA_used_by_DMS
  • read_AScore_results_from_DMS
  • path_to_study_design_from_DMS
  • read_masic_data_from_DMS
  • read_msfragger_data_from_DMS

@vladpetyuk vladpetyuk marked this pull request as ready for review August 14, 2024 20:47
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@vladpetyuk vladpetyuk left a comment

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Overall looks reasonable.

@vladpetyuk vladpetyuk merged commit bfe72c3 into master Aug 14, 2024
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@vladpetyuk vladpetyuk deleted the db-upgrade-fixes branch August 14, 2024 20:49
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2 participants