Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

A command-line tool to generate SBGN images for PC pathways #1443

Merged
merged 10 commits into from
Jan 29, 2024
Merged

A command-line tool to generate SBGN images for PC pathways #1443

merged 10 commits into from
Jan 29, 2024

Commits on Jan 8, 2024

  1. Add syblars service

    @jvwong
    jvwong committed Jan 8, 2024
    Configuration menu
    Copy the full SHA
    14b1bd2 View commit details
    Browse the repository at this point in the history

Commits on Jan 9, 2024

  1. A cli for sourcing and creating SBGN pathway images

    @jvwong
    jvwong committed Jan 9, 2024
    Configuration menu
    Copy the full SHA
    af5ddde View commit details
    Browse the repository at this point in the history

  2. Add the syblars Docker file.

    @jvwong
    jvwong committed Jan 9, 2024
    Configuration menu
    Copy the full SHA
    83abcf6 View commit details
    Browse the repository at this point in the history

  3. Make the image dump path configurable.

    @jvwong
    jvwong committed Jan 9, 2024
    Configuration menu
    Copy the full SHA
    08bafc1 View commit details
    Browse the repository at this point in the history

  4. Document new config variables and cli instructions

    @jvwong
    jvwong committed Jan 9, 2024
    Configuration menu
    Copy the full SHA
    d41f7e4 View commit details
    Browse the repository at this point in the history

  5. Add retry on fail.

    @jvwong
    jvwong committed Jan 9, 2024
    Configuration menu
    Copy the full SHA
    145d821 View commit details
    Browse the repository at this point in the history

Commits on Jan 10, 2024

  1. Typo in snapshot cli instructions.

    @jvwong
    jvwong committed Jan 10, 2024
    Configuration menu
    Copy the full SHA
    a021ee5 View commit details
    Browse the repository at this point in the history

Commits on Jan 16, 2024

  1. Do not track pathway image files

    @jvwong
    jvwong committed Jan 16, 2024
    Configuration menu
    Copy the full SHA
    8baeed8 View commit details
    Browse the repository at this point in the history

  2. Bump up max RAM for nodejs for syblars.

    @jvwong
    jvwong committed Jan 16, 2024
    Configuration menu
    Copy the full SHA
    e74b5d2 View commit details
    Browse the repository at this point in the history

  3. Use default size rendering settings

    @jvwong
    jvwong committed Jan 16, 2024
    Configuration menu
    Copy the full SHA
    df0e232 View commit details
    Browse the repository at this point in the history