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add plots of summary table #146
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roadmap |
Does anyone have a sense of what these plots would look like? @mattcieslak? |
Not sure if related but back in the days I was trying to create some summary figures of BIDS dataset contents: I started a bids app for that but it is dormant for now: https://github.com/Remi-Gau/bidsgnostic |
I think the original idea was to have a few plots in a dashboard-style html page. Some example plots would be:
This wasn't fully thought out, but there are probably some other useful visualizations. |
I did not know missingno: should probably have used that
thanks!!! my thought was to actually maybe have another pybids extension like pybids-reports that would be independent of the bids app bidsgnostic. if that could be useful for you, I could extract it into a separate package. |
@mattcieslak I like the idea of bar plots- especially if we could use something like bokeh to show the filename patterns associated with each acquisition group in a popup. @Remi-Gau a pybids extension might be the way to go for the basic plots. That way CuBIDS could just include it as a dependency and focus its efforts on the curation steps. |
use matplotlib/seaborn (see Brainhack tutorial)
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