Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Topic/total sugar #75

Open
wants to merge 3 commits into
base: master
Choose a base branch
from
Open

Topic/total sugar #75

Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
b2c6f23
fix nirs sugar trait definitions
bellerbrock Oct 1, 2018
a81708c
Merge branch 'master' into topic/total_sugar
bellerbrock Oct 1, 2018
8ac8b14
add updated and corrected total sugar traits
bellerbrock Oct 1, 2018
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
51 changes: 38 additions & 13 deletions sweetpotato_trait.obo
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,7 @@ date: 12:02:2018 19:35
saved-by: vagrant
auto-generated-by: OBO-Edit 2.3.1
default-namespace: SweetpotatoDefault
ontology: TEMP

[Term]
id: CO_331:0000000
Expand Down Expand Up @@ -1058,7 +1059,6 @@ name: taking standardized photo
namespace: SweetpotatoMethod
def: "Visual estimation" []
is_a: CO_331:1000014 ! Estimation
relationship: method_of CO_331:0000402 ! total sugar content
relationship: method_of CO_331:0000403 ! appearance of plant
relationship: method_of CO_331:0000404 ! appearance of flower
relationship: method_of CO_331:0000405 ! appearance of roots
Expand Down Expand Up @@ -1465,7 +1465,7 @@ relationship: scale_of CO_331:00001143 ! soils insect evaluation
id: CO_331:0000115
name: starch content
namespace: SweetpotatoTrait
def: "Storage root starch content evaluated in percentage dry weight" []
def: "Storage root starch content" []
synonym: "RtFlsSta" EXACT []
is_a: CO_331:1000007 ! Quality_trait
created_by: Z. Huaman
Expand All @@ -1474,7 +1474,7 @@ created_by: Z. Huaman
id: CO_331:0000118
name: fructose content
namespace: SweetpotatoTrait
def: "Fructose content of the root" []
def: "Storage root fructose content" []
synonym: "RtFlsFru" EXACT []
is_a: CO_331:1000007 ! Quality_trait
created_by: W. Grueneberg
Expand All @@ -1483,7 +1483,7 @@ created_by: W. Grueneberg
id: CO_331:0000121
name: glucose content
namespace: SweetpotatoTrait
def: "Glucose content of the root" []
def: "Storage root glucose content" []
synonym: "RtFlsGlu" EXACT []
is_a: CO_331:1000007 ! Quality_trait
created_by: W. Grueneberg
Expand All @@ -1492,7 +1492,7 @@ created_by: W. Grueneberg
id: CO_331:0000124
name: sucrose content
namespace: SweetpotatoTrait
def: "Sucrose content of the root" []
def: "Storage root sucrose content" []
synonym: "RtFlsSuc" EXACT []
is_a: CO_331:1000007 ! Quality_trait
created_by: W. Grueneberg
Expand All @@ -1501,7 +1501,7 @@ created_by: W. Grueneberg
id: CO_331:0000127
name: maltose content
namespace: SweetpotatoTrait
def: "Maltose content of the root" []
def: "Storage root maltose content" []
synonym: "RtFlsMal" EXACT []
is_a: CO_331:1000007 ! Quality_trait
created_by: W. Grueneberg
Expand Down Expand Up @@ -3417,7 +3417,7 @@ created_by: Z. Huaman
id: CO_331:0000402
name: total sugar content
namespace: SweetpotatoTrait
def: "Total sugar content" []
def: "Storage root total sugar content" []
synonym: "RtTSgC" EXACT []
is_a: CO_331:1000007 ! Quality_trait
created_by: Z. Huaman
Expand Down Expand Up @@ -5000,15 +5000,15 @@ relationship: variable_of CO_331:0000401 ! reaction to other mycoplasma

[Term]
id: CO_331:0000766
name: Total sugar content estimating 1-9
name: Total sugar content of raw storage roots percent
namespace: SweetpotatoTrait
def: "Total sugar content" []
synonym: "RtTSgC_Et_1to9" EXACT []
synonym: "TOTSUG" EXACT []
def: "Total sugar content of the raw storage root expressed as percent" []
synonym: "RAWTOTSUG" EXACT []
synonym: "RwRtTS_Ms_pct" EXACT []
is_a: CO_331:1000003 ! Variables
relationship: variable_of CO_331:00001093 ! taking standardized photo
relationship: variable_of CO_331:00001094 ! rttsgc
relationship: variable_of CO_331:0000402 ! total sugar content
relationship: variable_of CO_331:0000900 ! %
relationship: variable_of CO_331:2000032 ! measurement of raw total sugar content

[Term]
id: CO_331:0000767
Expand Down Expand Up @@ -7303,6 +7303,30 @@ relationship: variable_of CO_331:0000118 ! fructose content
relationship: variable_of CO_331:0000900 ! %
relationship: variable_of CO_331:2000022 ! measurement of cooked fructose content

[Term]
id: CO_331:2000032
name: measurement of raw total sugar content
namespace: SweetpotatoMethod
is_a: CO_331:1000011 ! Measurement

[Term]
id: CO_331:2000033
name: measurement of cooked total sugar content
namespace: SweetpotatoMethod
is_a: CO_331:1000011 ! Measurement

[Term]
id: CO_331:2000034
name: Total sugar content of cooked storage roots percent
namespace: SweetpotatoTrait
def: "Total sugar content of the cooked storage root expressed as percent" []
synonym: "CkRtTS_Ms_pct" EXACT []
synonym: "COOKTOTSUG" EXACT []
is_a: CO_331:1000003 ! Variables
relationship: variable_of CO_331:0000402 ! total sugar content
relationship: variable_of CO_331:0000900 ! %
relationship: variable_of CO_331:2000033 ! measurement of cooked total sugar content

[Typedef]
id: method_of
name: method_of
Expand All @@ -7314,3 +7338,4 @@ name: scale_of
[Typedef]
id: variable_of
name: variable_of