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pubmlst_client
pubmlst_client PublicList and download schemes from pubMLST.org and other BIGSDB servers
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galaxy-tool-tutorials PublicGalaxy tool training materials being developed for in-house workshops.
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irida-plugin-snippy-phylogenomics
irida-plugin-snippy-phylogenomics PublicCall core SNPs agains a reference genome for a set of bacterial isolates, and build a phylogenetic tree based on the core-genome SNP information.
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A question and answer web form system for exploring the research questions and datasets pertinent to an emerging infectious disease outbreak.
Public-Health-Bioinformatics/decision-tree’s past year of commit activity - irida-plugin-snippy-single Public
Call SNPs and indels between a reference genome and your sequence data
Public-Health-Bioinformatics/irida-plugin-snippy-single’s past year of commit activity - irida-plugin-snippy-phylogenomics Public
Call core SNPs agains a reference genome for a set of bacterial isolates, and build a phylogenetic tree based on the core-genome SNP information.
Public-Health-Bioinformatics/irida-plugin-snippy-phylogenomics’s past year of commit activity