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Add `ruff` linter fixes and checks #14

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Run time

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Job	Run time
Ruff Linting	4s
header test	53s
run_all.py	5m 1s
Basic regression tests	3m 14s
straight_tests.py	52s
no mpi4py	1m 24s
schur-complement (3.8)	1m 59s
schur-complement (3.9)	2m 4s
admm wrapper tests	1m 34s
aph tests	1m 6s
confidence intervals tests	1m 45s
pickled bundles tests	49s
tests on some cylinders	1m 33s
generic_tester.py	1m 54s
gradient and rho tests	1m 54s
pysp tests	46s
	26m 52s