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2D Builder
Tony Schaefer edited this page Oct 11, 2021
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With the 2D Builder tool, you can sketch a 2D representation of your molecule and the molecule in ChimeraX. The 3D coordinates can also be refined using a semiempirical method. The sketcher uses ChemDoodle Web Components. 3D structure generation uses an online web API developed in the NCI/CADD group. Refinement with a semiemprical method uses SQM, which is part of AmberTools and included in ChimeraX.