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Clustering tests slowdown #250

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jakobnissen opened this issue Nov 7, 2023 · 1 comment
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Clustering tests slowdown #250

jakobnissen opened this issue Nov 7, 2023 · 1 comment
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Version 5

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@jakobnissen
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The unittests for clustering has slowed down significantly. We should profile them to see what's up with that.
Could perhaps be same bug as in #232.
You can time them by running python -m pytest . --durations=0 -We
@jakobnissen jakobnissen added this to the Version 5 milestone Nov 9, 2023
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Turns out the regression came from the change of the hyperparameter _MEDOID_RADIUS from 0.05 to 0.1. Closing as duplicate of #258

@jakobnissen jakobnissen mentioned this issue Nov 12, 2023
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@microbiomix microbiomix mentioned this issue Mar 20, 2024
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