update data

R_scripts/CI_2_progress_map.R

@@ -56,8 +56,8 @@ sf_data_errors <- sf_data %>%
   mutate(
     fill = case_when(
       PLOT %in% error_quadrats$PLOT ~ "Error",
-      PLOT %in% warning_quadrats$PLOT ~ "Warning",
       PLOT %in% missing_stems$PLOT ~ "Missed Stem",
+      PLOT %in% warning_quadrats$PLOT ~ "Warning",
       TRUE ~ fill))
 
 # Join the combined survey and error data with the shapefile

raw_data/Field_Maps/SCBI_stems_mortality_2024_1.csv

@@ -125,7 +125,7 @@
 124,1406,140674,3,fagr,,100,LI,SV,,,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,ceb12064-abc4-40eb-a172-a2a2a252c036,3/19/2024 4:37:01 PM,shuej21,not started,
 125,1425,142371,2,cagl,1.3,220,LI,,,A,,NA,NA,NA,NA,,LI,A,2,100,90,,,,,,,,,,,,,,a8785b86-19c9-46b3-9cce-cf577377cb6c,9/13/2024 8:38:47 PM,shuej21,finished,
 126,1505,150783,2,litu,2.3,278,LI,"BT,A",Ladder needed to measure,A,,NA,NA,NA,NA,,LI,A,3,100,100,,,,,,,,,,,,,,59986610-8ea4-4d2b-86b0-26b115926d54,4/18/2024 7:49:15 PM,shuej21,finished,
-127,1514,151168,2,prav,1.3,152,LI,B,,AU,"B,R",NA,3,NA,NA,,,,,,,,,,,,,,,,,,,,6e6f8955-5165-458c-87b7-35e324e61ebd,3/19/2024 4:37:01 PM,shuej21,not started,
+127,1514,151168,2,prav,1.3,152,LI,B,,AU,"B,R",NA,3,NA,NA,,LI,AU,2,40,15,W,"DF,B,W",,1,,,,,,,,Broken 75% up; ES,,6e6f8955-5165-458c-87b7-35e324e61ebd,10/3/2024 2:10:33 PM,shuej21,finished,
 128,1524,152475,2,cagl,1.3,222,LI,,,AU,"AN,W",1,NA,NA,NA,,LI,AU,3,100,95,AN,"R,W,AN",,1,3,,,,,,,Woodpecker holes. Stem is hollow,,f4e1a8da-0d46-49c7-9fbe-77659c29041b,9/13/2024 7:18:13 PM,shuej21,finished,
 129,1524,152485,2,cagl,1.3,129,LI,,,A,,NA,NA,NA,NA,,LI,A,2,100,100,,,,,,,,,,,,,,b058f8ea-c1cd-488c-b0df-cedfe99813a7,9/17/2024 6:22:05 PM,shuej21,finished,
 130,1525,152494,2,quve,1.3,461,LI,DV,,AU,AN,NA,NA,NA,NA,,LI,A,3,100,95,,,,,,,,,,,,,,77670a0d-27d7-4234-bf83-9be9e49ae96b,9/13/2024 6:33:20 PM,shuej21,finished,
@@ -139,17 +139,17 @@
 138,1607,160770,2,litu,1.3,332,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,6685c764-0306-457e-8ac0-11df36b18de3,3/19/2024 4:37:01 PM,shuej21,not started,
 139,1609,160786,2,litu,1.3,164,LI,,,A,,NA,NA,NA,NA,,LI,A,3,100,100,,,,,,,,,,,,,,d6e6c98e-e699-4644-a758-c8700edcb02b,5/1/2024 5:34:47 PM,shuej21,finished,
 140,1610,160812,2,litu,1.3,225,LI,,M moved to uphill side,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,84b49a5c-8714-4df2-a692-f7a30336f727,3/19/2024 4:37:01 PM,shuej21,not started,
-141,1617,162103,2,cagl,1.3,120,LI,B,,AU,B,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,e3f3a74d-6958-4177-bb3a-e9e4542d4121,3/19/2024 4:37:01 PM,shuej21,not started,
+141,1617,162103,2,cagl,1.3,120,LI,B,,AU,B,NA,NA,NA,NA,,LI,AU,2,30,15,B,B,1,,,,,,,,,Break 50% up; ES,,e3f3a74d-6958-4177-bb3a-e9e4542d4121,10/3/2024 6:19:56 PM,shuej21,finished,
 142,1626,162438,2,qupr,1.3,120,LI,,,A,,NA,NA,NA,NA,,LI,A,2,100,90,,,,,,,,,,,,,,665ff13d-8cef-49fd-b15e-15371722621d,9/16/2024 7:12:55 PM,shuej21,finished,
 143,1631,162489,2,cagl,1.3,108,LI,,,AU,W,1,NA,NA,NA,,LI,AU,2,100,100,R,"W,R",,1,1,,,,,,,,,a4912681-c5ed-48d2-9fc6-a8e08de0b092,9/17/2024 6:04:29 PM,shuej21,finished,
 144,1629,162575,2,juni,1.4,369,LI,A,,A,,NA,NA,NA,NA,,LI,A,3,100,80,,,,,,,,,,,,,,2ea1c937-2ad6-454c-802b-eff9b0a0399e,9/17/2024 6:16:17 PM,shuej21,finished,
 145,1709,171269,2,litu,2.3,435,LI,"SV,BT,DV,A",Ladder needed to measure,,,NA,NA,NA,NA,,LI,A,3,100,100,,,,,,,,,,,,,,d2f80c44-4ac8-48a5-aff4-6aa656aa3487,4/18/2024 3:42:12 PM,shuej21,finished,
 146,1728,172471,2,cagl,1.3,128,LI,,,A,,NA,NA,NA,NA,,LI,AU,1,100,100,W,"R,W",,1,2,,,,,,,ES,,f96adafb-254d-4035-90d2-6d3465eacc0c,9/16/2024 3:58:50 PM,shuej21,finished,
 147,1729,172483,2,litu,1.3,444,LI,,Western stem,A,,NA,NA,NA,NA,,LI,AU,3,100,95,K,K,,,,1,,,,,,Western stem; ES,,b54b0fa1-4477-4b17-b0e8-048bc7a0dc1f,9/16/2024 3:36:37 PM,shuej21,finished,
-148,1812,180818,2,tiam,1.3,290,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,574744ce-d5fc-4fad-b3a8-574e048e0cff,3/19/2024 4:37:01 PM,shuej21,not started,
-149,1813,180988,2,acru,1.3,196,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,005cc26d-e6c3-4f61-aa7c-84da9152c881,3/19/2024 4:37:01 PM,shuej21,not started,
-150,1813,180988,3,acru,1.3,259,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,22a3171b-10a8-4147-a5e2-7ce88dda7264,3/19/2024 4:37:01 PM,shuej21,not started,
-151,1826,182421,2,cato,1.3,239,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,487bd192-454e-45b6-bed7-c6402b33ec69,3/19/2024 4:37:01 PM,shuej21,not started,
+148,1812,180818,2,tiam,1.3,290,LI,,,A,,NA,NA,NA,NA,,LI,A,2,100,97,,,,,,,,,,,,,,574744ce-d5fc-4fad-b3a8-574e048e0cff,10/3/2024 2:43:00 PM,shuej21,finished,
+149,1813,180988,2,acru,1.3,196,LI,,,A,,NA,NA,NA,NA,,LI,A,2,100,95,,,,,,,,,,,,,,005cc26d-e6c3-4f61-aa7c-84da9152c881,10/3/2024 3:35:41 PM,shuej21,finished,
+150,1813,180988,3,acru,1.3,259,LI,,,A,,NA,NA,NA,NA,,LI,A,2,95,95,,,,,,,,,,,,,,22a3171b-10a8-4147-a5e2-7ce88dda7264,10/3/2024 3:35:09 PM,shuej21,finished,
+151,1826,182421,2,cato,1.3,239,LI,,,A,,NA,NA,NA,NA,,LI,A,2,100,100,,,,,,,,,,,,,,487bd192-454e-45b6-bed7-c6402b33ec69,10/2/2024 3:12:51 PM,shuej21,finished,
 152,1823,182566,2,astr,1.3,105,LI,,,,,NA,NA,NA,NA,,LI,A,3,100,95,,,,,,,,,,,,,,3f51d40e-a411-46ba-a2f0-5085db067a15,9/20/2024 7:44:23 PM,shuej21,finished,
 153,1828,182671,2,quru,1.3,661,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,54c0aee3-5c61-4be2-8ca7-d4cc094cdf62,3/19/2024 4:37:01 PM,shuej21,not started,
 154,1829,182680,2,cagl,1.3,242,LI,,,A,,NA,NA,NA,NA,,LI,A,3,95,95,,,,,,,,,,,,ES,,add74fea-bc4e-4486-a064-daadb6f5176e,9/17/2024 4:22:21 PM,shuej21,finished,
@@ -158,10 +158,10 @@
 157,1912,190557,3,tiam,1.3,147,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,9e396500-e9bf-4453-bce6-e84a00f7b4d9,3/19/2024 4:37:01 PM,shuej21,not started,
 158,1912,190559,2,tiam,1.3,265,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,9d8ac378-737e-49aa-8d92-7e5c5e64c1d8,3/19/2024 4:37:01 PM,shuej21,not started,
 159,1922,192121,2,litu,1.3,281,LI,,,AU,K,NA,NA,1,NA,,LI,AU,3,90,85,K,K,,,,1,,,,,,ES,,c7b28b53-ab1e-4850-924e-c26dbc46e6f1,9/25/2024 3:57:54 PM,shuej21,finished,
-160,1926,192625,2,cagl,1.3,164,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,6892cf2d-b2ce-4dbe-9eda-f9b058255106,3/19/2024 4:37:01 PM,shuej21,not started,
+160,1926,192625,2,cagl,1.3,164,LI,,,A,,NA,NA,NA,NA,,LI,A,2,90,90,,,1,,,,,,,,,ES,,6892cf2d-b2ce-4dbe-9eda-f9b058255106,10/2/2024 2:59:30 PM,shuej21,finished,
 161,1929,192669,2,cagl,1.3,154,LI,,,A,,NA,NA,NA,NA,,LI,A,2,80,80,,,,,,,,,,,,ES,,fcafebf3-9501-4976-9695-105b2571ccb0,9/26/2024 7:32:31 PM,shuej21,finished,
-162,1931,192690,2,cagl,1.3,235,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,cffb7566-b309-4d63-96ce-55eec239b8b1,3/19/2024 4:37:01 PM,shuej21,not started,
-163,1931,192690,3,cagl,1.3,110,LI,,,A,,NA,NA,NA,NA,,,,,,,,,,,,,,,,,,,,9b728ce8-f8e6-478b-b369-a1e51f8c0357,3/19/2024 4:37:01 PM,shuej21,not started,
+162,1931,192690,2,cagl,1.3,235,LI,,,A,,NA,NA,NA,NA,,LI,AU,2,100,95,AN,"CR,AN",,,,,,,,,,Sapsucker holes,,cffb7566-b309-4d63-96ce-55eec239b8b1,10/2/2024 2:47:52 PM,shuej21,finished,
+163,1931,192690,3,cagl,1.3,110,LI,,,A,,NA,NA,NA,NA,,LI,AU,2,95,90,CR,CR,,,,,,,,,,,,9b728ce8-f8e6-478b-b369-a1e51f8c0357,10/2/2024 2:44:41 PM,shuej21,finished,
 164,2001,200038,2,litu,2,885,LI,"BT,A,M",,AU,BB,NA,NA,NA,NA,,LI,AU,3,90,85,R,"W,R",0,2,1,,,,,,,,,1e246697-f11b-438a-a779-9ff38dec22ac,4/12/2024 4:06:17 PM,shuej21,finished,
 165,2002,200347,2,ploc,1.3,382,LI,,,A,,NA,NA,NA,NA,,LI,A,4,100,95,,,,,,,,,,,,,,bba042e6-9674-43ee-8859-e32a302e909f,4/26/2024 6:08:36 PM,shuej21,finished,
 166,2022,202098,2,caovl,1.3,121,LI,DV,,A,,NA,NA,NA,NA,,LI,A,1,95,90,,,,,,,,,,,,,,f9b8ebe2-d258-4d86-900d-4ac7ece9457b,9/25/2024 6:08:37 PM,shuej21,finished,