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fix(data): add CASP as organization (#2194)
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* add CASP as organization

* fix name for CASP

* add contribution roles for casp

* update challenge count
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vpchung authored Oct 5, 2023
1 parent 76d4bbe commit 5c42537
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"947","277","4","challenge_organizer"
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"947","277","4","challenge_organizer"
"948","266","330","challenge_organizer"
"949","266","179","challenge_organizer"
"950","80","9","challenge_organizer"
"951","81","9","challenge_organizer"
"952","158","9","challenge_organizer"
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"3","Critical Assessment of protein Function Annotation","","cafa","logo/cafa.png","https://www.biofunctionprediction.org/cafa/","The Critical Assessment of protein Function Annotation algorithms (CAFA) is an experiment designed to assess the performance of computational methods dedicated to predicting protein function, often using a time challenge. Briefly, CAFA organizers provide a large number of unannotated or incompletely annotated protein sequences. The predictors then predict the function of these proteins by associating them with Gene Ontology terms or Human Phenoytpe Ontology terms. Following the prediction deadline, there is a wait period of several months during which some proteins whose functions were unknown will receive experimental verification. Those proteins constitute the benchmark set, against which the methods are tested. Other data sources include experiments by wet lab collaborators and biocuration dedicated to CAFA.","2","2023-06-23 00:00:00","2023-07-26 20:13:18","CAFA"
"4","Critical Assessment of Genome Interpretation","[email protected]","cagi","logo/cagi.png","https://genomeinterpretation.org/challenges.html","The Critical Assessment of Genome Interpretation (CAGI) is a community experiment to objectively assess computational methods for predicting the phenotypic impacts of genomic variation. CAGI participants are provided genetic variants and make predictions of resulting phenotypes. These predictions are evaluated against experimental data by independent assessors.","26","2023-06-23 00:00:00","2023-07-26 20:13:19","CAGI"
"7","Critical Assessment of Metagenome Interpretation","","cami","logo/cami.png","https://data.cami-challenge.org/","CAMI, the initiative for the “Critical Assessment of Metagenome Interpretation” aims to evaluate methods in metagenomics independently, comprehensively and without bias. The initiative supplies users with exhaustive quantitative data about the performance of methods in all relevant scenarios. It therefore guides users in the selection and application of methods and in their proper interpretation. Furthermore it provides valuable information to developers, allowing them to identify promising directions for their future work. CAMI organized in 2015 the first community driven benchmarking challenge in metagenomics. For the second CAMI challenge (starting on January 16th, 2019) visit https://data.cami-challenge.org","2","2023-06-23 00:00:00","2023-07-26 20:13:21","CAMI"
"9","Critical Assessment of Structure Prediction","[email protected]","casp","logo/casp.png","https://predictioncenter.org/","Our goal is to help advance the methods of identifying protein structure from sequence. The Center has been organized to provide the means of objective testing of these methods via the process of blind prediction. The Critical Assessment of protein Structure Prediction (CASP) experiments aim at establishing the current state of the art in protein structure prediction, identifying what progress has been made, and highlighting where future effort may be most productively focused.","3","2023-06-23 00:00:00","2023-10-04 20:09:29","CASP"
"12","Medical Image Computing and Computer Assisted Intervention Society","","miccai","logo/miccai.png","http://www.miccai.org/special-interest-groups/challenges/miccai-registered-challenges/","The Medical Image Computing and Computer Assisted Intervention Society (the MICCAI Society) is dedicated to the promotion, preservation and facilitation of research, education and practice in the field of medical image computing and computer assisted medical interventions including biomedical imaging and medical robotics. The Society achieves this aim through the organization and operation of annual high quality international conferences, workshops, tutorials and publications that promote and foster the exchange and dissemination of advanced knowledge, expertise and experience in the field produced by leading institutions and outstanding scientists, physicians and educators around the world. The MICCAI Society is committed to maintaining high academic standards and independence from any personal, political or commercial interests.","16","2023-06-23 00:00:00","2023-07-26 20:13:24","MICCAI"
"13","precisionFDA","[email protected]","pfda","logo/precisionfda.png","https://precision.fda.gov/challenges","A secure, collaborative, high-performance computing platform that builds a community of experts around the analysis of biological datasets in order to advance precision medicine.","18","2023-06-23 00:00:00","2023-07-26 20:13:25","pFDA"
"15","National Institutes of Health","","nih","logo/nih.png","https://www.nih.gov/","The National Institutes of Health (NIH), a part of the U.S. Department of Health and Human Services, is the nation's medical research agency — making important discoveries that improve health and save lives.","10","2023-06-23 00:00:00","2023-07-26 20:13:26","NIH"
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"168","Rosenberg Alzheimer's Project","","rosenberg-alzheimers-project","","","This organization may no longer exist or has been merged under another organization.","1","2023-06-23 00:00:00","2023-08-08 17:59:30",""
"169","Rush University Medical Center","","rush","logo/rush.jpg","https://www.rush.edu/","Rush University System for Health is consistently recognized for our outstanding patient care, education, research and community partnerships. Learn more about our mission, history, policies and leadership.","1","2023-06-23 00:00:00","2023-07-26 20:15:38","RUSH"
"170","RWTH Aachen University","","rwth-aachen","logo/rwth-aachen.png","https://www.rwth-aachen.de/go/id/a/?lidx=1","RWTH Aachen University is a place where the future of our industrialised world is thought out. The University is proving to be a hotspot with increasing international recognition where innovative answers to global challenges are developed.","8","2023-06-23 00:00:00","2023-07-26 20:15:39",""
"171","Sage Bionetworks","[email protected]","sage","logo/sage-bionetworks.png","https://sagebionetworks.org/","Sage Bionetworks is a nonprofit health research organization that is speeding the translation of science into medicine. We believe that high-quality, well-annotated data acts as the foundation of modern biomedical innovation. We dream of a world where people work together across institutional boundaries to meaningfully address major medical research problems. We incubate new ways for diverse groups of people to practice research together. We advance our practices using an integrated and iterative design cycle that plays out between our scientific teams and our core service teams. As our innovations become norms, we develop them into robust core capabilities that can be put into practice across our portfolio of research programs. This portfolio includes publicly funded programs that create data resources and knowledge bases, pre-competitive collaborations across industry partners, and federated networks of healthcare data providers. In turn, these projects provide an active p...","48","2023-06-23 00:00:00","2023-07-26 20:15:40",""
"171","Sage Bionetworks","[email protected]","sage-bionetworks","logo/sage-bionetworks.png","https://sagebionetworks.org/","Sage Bionetworks is a nonprofit health research organization that is speeding the translation of science into medicine. We believe that high-quality, well-annotated data acts as the foundation of modern biomedical innovation. We dream of a world where people work together across institutional boundaries to meaningfully address major medical research problems. We incubate new ways for diverse groups of people to practice research together. We advance our practices using an integrated and iterative design cycle that plays out between our scientific teams and our core service teams. As our innovations become norms, we develop them into robust core capabilities that can be put into practice across our portfolio of research programs. This portfolio includes publicly funded programs that create data resources and knowledge bases, pre-competitive collaborations across industry partners, and federated networks of healthcare data providers. In turn, these projects provide an active p...","48","2023-06-23 00:00:00","2023-10-05 15:22:50",""
"172","Sanofi","","sanofi","logo/sanofi.jpg","https://www.sanofi.com/","We are Sanofi. We are an innovative global healthcare company, driven by one purpose: we chase the miracles of science to improve people's lives. Our teams across the world strive to transform the practice of medicine, turning the impossible into the possible for patients. We provide potentially life-changing treatments and the protection of life-saving vaccines to millions of people, and affordable access to our medicines in some of the world's poorest countries.","2","2023-06-23 00:00:00","2023-07-26 20:15:41",""
"173","Sapienza University of Rome","","sapienza","logo/sapienza.png","https://www.uniroma1.it/en/pagina-strutturale/home","Founded in 1303, Sapienza is the oldest university in Rome and the largest in Europe. Its mission is to contribute to the development of a knowledge society through research, excellence, quality education and international cooperation.","3","2023-06-23 00:00:00","2023-07-26 20:15:43",""
"174","Sartorius AG","","sartorius","logo/sartorius.jpg","https://www.sartorius.com/en","Sartorius AG is an international pharmaceutical and laboratory equipment supplier, covering the segments of Bioprocess Solutions and Lab Products & Services.","1","2023-06-23 00:00:00","2023-07-26 20:15:42",""
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"328","ContextVision","","contextvision","","https://www.contextvision.com/","Our cutting-edge technology helps doctors accurately interpret medical images, a crucial foundation for better diagnosis and treatment. Healthcare providers worldwide face the same key challenge – a challenge that ContextVision is helping to solve: how to increase patient care while coping with limited resources. ContextVision provides intelligent technology that improves healthcare service and outcomes for more people. The company specializes in image analysis and artificial intelligence.","1","2023-09-15 17:21:50","2023-09-15 17:22:34",""
"329","Karolinska Institute","","ki","","https://ki.se/en","Karolinska Institutet is one of the world’s leading medical universities. Our vision is to advance knowledge about life and strive towards better health for all. Karolinska Institutet accounts for the single largest share of all academic medical research conducted in Sweden and offers the country’s broadest range of education in medicine and health sciences. The Nobel Assembly at Karolinska Institutet selects the Nobel laureates in Physiology or Medicine.","1","2023-09-15 17:24:17","2023-09-15 17:53:16","KI"
"330","Research to the People","[email protected]","research-to-the-people","logo/research-to-the-people.png","https://www.researchtothepeople.org/","Research to the People is a patient- partnered research program for open Oncology and Rare Disease Cases.","1","2023-09-28 21:15:01","2023-09-28 23:23:01",""
"331","Swiss Federal Institute of Technology Lausanne","","epfl","","https://www.epfl.ch","The École polytechnique fédérale de Lausanne is a public research university in Lausanne, Switzerland. Established in 1853, EPFL has placed itself as a university specializing in engineering and natural sciences.","0","2023-10-05 02:44:50","2023-10-05 02:46:12","EPFL"

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