feat(openchallenges): generate challenge headlines using AWS Bedrock

[tschaffter]

Closes #2280

Changelog

• Add Python script to the project openchallenges-notebook
• Update existing notebook to generate challenge headlines with AWS Bedrock (deprecated)

Notes

• VS Code notebooks are painfully slow to run. From a brief search, this may happen when using VS Code over SSH. To investigate further. Instead, I created a Python script to generate the headlines.

Preview

Run the script

nx prepare openchallenges-notebook
cd apps/openchallenges/notebook
poetry run python src/challenge_headline/challenge_headline_llm.py

Headlines

  {
    "id": 1,
    "slug": "network-topology-and-parameter-inference",
    "name": "Network Topology and Parameter Inference",
    "headline": "",
    "headline_alternatives": [
      "1. Optimize methods to estimate biology model parameters",
      "2. Develop optimization for accurate biology model predictions ",
      "3. Apply optimization to estimate parameters in Systems Biology",
      "4. Select experiments to optimize Systems Biology model accuracy",
      "5. Perturbation prediction through optimization of Systems Biology models"
    ]
  },
  {
    "id": 2,
    "slug": "breast-cancer-prognosis",
    "name": "Breast Cancer Prognosis",
    "headline": "",
    "headline_alternatives": [
      "1. Predict breast cancer survival from clinical and genomic data",
      "2. Assess models for breast cancer prognosis using clinical and molecular data ",
      "3. Evaluate computational models for breast cancer survival prediction",
      "4. Benchmark algorithms to predict breast cancer prognosis ",
      "5. Assess accuracy of models predicting breast cancer patient survival"
    ]
  },
...