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SainsburyWellcomeCentre

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  1. NeuralPlayground NeuralPlayground Public

    The standardised environment for the hippocampus and entorhinal cortex models

    Python 63 6

  2. lasagna lasagna Public

    3-D imaging visualisation through slicing

    Python 27 7

  3. Pyper Pyper Public

    Motion Tracking

    Python 13 10

  4. masiv masiv Public

    MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data

    MATLAB 12 5

  5. neuro neuro Public archive

    Visualisation and analysis of brain imaging data

    Python 10 4

  6. AllenBrainAPI AllenBrainAPI Public

    Access the Allen Brain Atlas API from MATLAB

    MATLAB 9 2

Repositories

Showing 10 of 44 repositories
  • aeon_mecha Public

    Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.

    SainsburyWellcomeCentre/aeon_mecha’s past year of commit activity
    Python 4 BSD-3-Clause 5 54 (3 issues need help) 5 Updated Sep 20, 2024
  • aeon_analysis Public

    Data Analysis code for Project Aeon

    SainsburyWellcomeCentre/aeon_analysis’s past year of commit activity
    0 BSD-3-Clause 0 2 0 Updated Sep 18, 2024
  • crabs-exploration Public

    A toolkit for detecting and tracking crabs in the field.

    SainsburyWellcomeCentre/crabs-exploration’s past year of commit activity
    Python 7 BSD-3-Clause 0 51 11 Updated Sep 16, 2024
  • FNT_timestamp_alignment Public

    Pipeline for aligning harp and ephys timestamps to a single master clock.

    SainsburyWellcomeCentre/FNT_timestamp_alignment’s past year of commit activity
    Jupyter Notebook 2 0 3 0 Updated Sep 12, 2024
  • FNT_behavior_analysis Public

    Pipeline for giving an overview of behavioural data from mice in the flexible navigation task.

    SainsburyWellcomeCentre/FNT_behavior_analysis’s past year of commit activity
    MATLAB 1 0 0 0 Updated Sep 10, 2024
  • aeon_experiments Public

    Experiment workflows for Project Aeon

    SainsburyWellcomeCentre/aeon_experiments’s past year of commit activity
    Python 2 BSD-3-Clause 0 89 1 Updated Sep 6, 2024
  • microharp Public

    A Harp protocol and device application framework micropython package.

    SainsburyWellcomeCentre/microharp’s past year of commit activity
    Python 4 BSD-3-Clause 1 0 1 Updated Sep 5, 2024
  • NeuralPlayground Public

    The standardised environment for the hippocampus and entorhinal cortex models

    SainsburyWellcomeCentre/NeuralPlayground’s past year of commit activity
    Python 63 MIT 6 8 2 Updated Sep 4, 2024
  • aeon_feeder_fix Public
    SainsburyWellcomeCentre/aeon_feeder_fix’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 1 Updated Aug 20, 2024
  • glmhmm Public Forked from irisstone/glmhmm

    code to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs). Fork for FlexiVexi

    SainsburyWellcomeCentre/glmhmm’s past year of commit activity
    Jupyter Notebook 1 15 0 0 Updated Aug 14, 2024
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