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@Single-Cell-Genomics-Group-CNAG-CRG

Single Cell Genomics Team (CNAG)

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  1. Tumor-Immune-Cell-Atlas Tumor-Immune-Cell-Atlas Public

    Code repository for the Tumor Immune Cell Atlas (TICA) project

    R 61 13

  2. TonsilAtlas TonsilAtlas Public

    Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)

    HTML 23 2

  3. ST-analysis ST-analysis Public

    General notes and resources on how to analyze Spatial Transcriptomics data

    HTML 12 4

  4. shiny-pathology shiny-pathology Public

    Shiny app to annotate spatial transcriptomics slides

    R 4

  5. SCrafty-package SCrafty-package Public

    R package with functions we can all benefit from

    R 3

  6. R2Python R2Python Public

    This repo documents how to translate common coding tasks from R to Python

    2

Repositories

Showing 9 of 9 repositories
  • TonsilAtlas Public

    Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)

    Single-Cell-Genomics-Group-CNAG-CRG/TonsilAtlas’s past year of commit activity
    HTML 23 MIT 2 0 0 Updated Oct 11, 2024
  • R2Python Public

    This repo documents how to translate common coding tasks from R to Python

    Single-Cell-Genomics-Group-CNAG-CRG/R2Python’s past year of commit activity
    2 0 0 0 Updated Jul 12, 2023
  • ST-analysis Public

    General notes and resources on how to analyze Spatial Transcriptomics data

    Single-Cell-Genomics-Group-CNAG-CRG/ST-analysis’s past year of commit activity
    HTML 12 4 0 0 Updated Jun 20, 2023
  • shiny-pathology Public

    Shiny app to annotate spatial transcriptomics slides

    Single-Cell-Genomics-Group-CNAG-CRG/shiny-pathology’s past year of commit activity
    R 4 GPL-3.0 0 0 0 Updated May 4, 2023
  • SCrafty-package Public

    R package with functions we can all benefit from

    Single-Cell-Genomics-Group-CNAG-CRG/SCrafty-package’s past year of commit activity
    R 3 MIT 0 1 0 Updated Aug 16, 2022
  • Tumor-Immune-Cell-Atlas Public

    Code repository for the Tumor Immune Cell Atlas (TICA) project

    Single-Cell-Genomics-Group-CNAG-CRG/Tumor-Immune-Cell-Atlas’s past year of commit activity
    R 61 13 3 0 Updated Mar 31, 2022
  • SincellTE-2022-ST-workshop Public

    Repository containing scripts for the "Advanced Spatial Analysis" we will give at SincellTE 2022

    Single-Cell-Genomics-Group-CNAG-CRG/SincellTE-2022-ST-workshop’s past year of commit activity
    HTML 1 1 0 0 Updated Jan 11, 2022
  • TICA_app Public

    Tumor Immune Cell Atlas Shiny App

    Single-Cell-Genomics-Group-CNAG-CRG/TICA_app’s past year of commit activity
    HTML 0 2 1 0 Updated Nov 9, 2021
  • shiny-annotation Public
    Single-Cell-Genomics-Group-CNAG-CRG/shiny-annotation’s past year of commit activity
    R 1 0 1 0 Updated Oct 12, 2021

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