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A platform that enables the visualization of individual genes for evidence of reannotation.

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DOI

vizER

A platform that enables the visualisation of individual genes for evidence of reannotation.

Related publication

Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders

David Zhang, Sebastian Guelfi, Sonia Garcia-Ruiz, Beatrice Costa, Regina H. Reynolds, Karishma D'sa, Wenfei Liu, Thomas Courtin, Amy Peterson, Andrew E. Jaffe, John Hardy, Juan A. Botía, Leonardo Collado-Torres, and Mina Ryten

SCIENCE ADVANCES, 10 Jun 2020, Vol 6, Issue 24, DOI: 10.1126/sciadv.aay8299

Description

This repository contains the User Interface (UI) code for the vizER platform.

Additionally, on the Wiki section, there is available a tutorial that fully explain the configuration needed to be able to install and expose vizER in a Linux web server environment.

Getting Started

vizER platform is fully working and can be reached following this link.

Developers

  • Sonia García-Ruiz - vizER UI developer.
  • David Zhang - vizER backend developer and first author of 'Incomplete annotation of OMIM genes is likely to be limiting the diagnostic yield of genetic testing, particularly for neurogenetic disorders'.

Acknowledgments