adding medaka version 2.0.1

[erinyoung]

There's a new version of medaka!

According to the release notes, this fixes a bug in medaka smolecule.

I copied the files from 2.0.0, updated the version arg, removed some unnecessary ls lines, and removed the -vv flags.

The full diff:

< ARG MEDAKA_VER="2.0.0"
---
> ARG MEDAKA_VER="2.0.1"
77d76
<     ls && \
127,128c126,127
< RUN pip install medaka-cpu==${MEDAKA_VER} --extra-index-url https://download.pytorch.org/whl/cpu -vv --no-cache-dir && \
<     pip install pyabpoa==${PYABPOA_VER} -vv --no-cache-dir
---
> RUN pip install medaka-cpu==${MEDAKA_VER} --extra-index-url https://download.pytorch.org/whl/cpu --no-cache-dir && \
>     pip install pyabpoa==${PYABPOA_VER} --no-cache-dir

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