add morphology functions and tests #238
Workflow file for this run
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# This workflows will upload a Python Package using Twine when a release is created | |
# For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries | |
name: tests | |
on: | |
push: | |
branches: | |
- main | |
tags: | |
- "v*" # Push events to matching v*, i.e. v1.0, v20.15.10 | |
pull_request: | |
branches: | |
- main | |
workflow_dispatch: | |
jobs: | |
test: | |
name: ${{ matrix.platform }} py${{ matrix.python-version }} | |
runs-on: ${{ matrix.platform }} | |
strategy: | |
matrix: | |
# platform: [ubuntu-latest, windows-latest, macos-latest] | |
platform: [ubuntu-latest] # windows cant get opencl set up | |
python-version: ['3.9', '3.10', '3.11'] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
# these libraries enable testing on Qt on linux | |
- uses: tlambert03/setup-qt-libs@v1 | |
# strategy borrowed from vispy for installing opengl libs on windows | |
- name: Install Windows OpenGL | |
if: runner.os == 'Windows' | |
run: | | |
git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git | |
powershell gl-ci-helpers/appveyor/install_opengl.ps1 | |
# Install OpenCL for Linux | |
- name: Install OpenCL on Linux | |
if: runner.os == 'Linux' | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y pocl-opencl-icd libpocl2 mesa-opencl-icd | |
# Install OpenCL for Windows | |
- name: Install OpenCL on Windows | |
if: runner.os == 'Windows' | |
run: | | |
conda install -y -c conda-forge pyopencl | |
curl -L -O https://tiker.net/ci-support-v0 | |
. ci-support-v0 | |
.ci/hack-intel-cl-into-conda-env.sh | |
# Set up OpenCL environment variables | |
- name: Set up OpenCL environment variables | |
run: | | |
echo "PYOPENCL_CTX='0'" >> $GITHUB_ENV | |
echo "PYOPENCL_COMPILER_OUTPUT=1" >> $GITHUB_ENV | |
# note: if you need dependencies from conda, considering using | |
# setup-miniconda: https://github.com/conda-incubator/setup-miniconda | |
# and | |
# tox-conda: https://github.com/tox-dev/tox-conda | |
- name: Set up miniconda ${{ matrix.python-version }} | |
uses: conda-incubator/[email protected] | |
with: | |
auto-update-conda: true | |
activate-environment: test | |
python-version: ${{ matrix.python-version }} | |
channels: conda-forge | |
- name: Install pocl on Linux | |
if: runner.os == 'Linux' | |
run: conda install -y pocl | |
- name: Install dependencies | |
run: | | |
python --version | |
conda install pyopencl | |
python -m pip install --upgrade pip | |
python -m pip install setuptools tox tox-gh-actions | |
# this runs the platform-specific tests declared in tox.ini | |
- name: Test with tox | |
uses: GabrielBB/xvfb-action@v1 | |
with: | |
run: python -m tox | |
env: | |
PLATFORM: ${{ matrix.platform }} | |
- name: Coverage | |
uses: codecov/codecov-action@v2 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
files: ./coverage.xml | |
flags: unittests | |
name: codecov-umbrella | |
fail_ci_if_error: true | |
deploy: | |
# this will run when you have tagged a commit, starting with "v*" | |
# and requires that you have put your twine API key in your | |
# github secrets (see readme for details) | |
needs: [test] | |
runs-on: ubuntu-latest | |
if: contains(github.ref, 'tags') | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python | |
uses: actions/setup-python@v4 | |
with: | |
python-version: "3.x" | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install -U setuptools setuptools_scm wheel twine build | |
- name: Build and publish | |
env: | |
TWINE_USERNAME: __token__ | |
TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }} | |
run: | | |
git tag | |
python -m build . | |
twine upload dist/* |