Skip to content

This is a walkthrough of the PFB2018 course taught at CSHL.

Notifications You must be signed in to change notification settings

UCGD/PFB2019-Walkthrough

Repository files navigation

UCGD Programming for Biology Walkthrough

This is a walkthrough of the PFB2018 course taught at CSHL.

I plan on starting at Python lecture one, which would skip the Unix and Git sections. However if you would like to review it, I would be willing to answer any questions via email, slack or in-person.

It would be beneficial if you have python3 installed on your system before we meet the first day, so we have a smooth start. Also I can help with this as needed.

Mac Python3 install instructions: Mac OS

Time and Location:

  • Starts Feb 4th 2019
  • Each Following Mondays 2:30-3:30
  • Room: Location

Format:

This class will be a 'free form' round table approach, where we can learn and discuss together, as opposed to a standing instructor method. Each week we will cover one Python section, and reserve the last ~10 minutes of class to review the prior weeks problem sets. I’m assuming the majority of participants will have a intermediate understanding of Python, or prior programming experience, however this class is open for all levels of understanding.

Participants: (14/20)

  • Shawn Rynearson
  • Karen Eilbeck
  • Aurelie Kapusta
  • Bushra Gorsi
  • Chris Fahim
  • Matt Velinder
  • Cecile Avery
  • Paula Florezsalcedo
  • Tonya Lee Disera
  • Sepideh Ebadi
  • Steven Boyden
  • Javier Hernandez
  • Preetida Bhetariya
  • Carson Holt
  • Sergiusz Wesolowski
  • Grange Simpson

Slack Channel:

utahgenomics -> pfbwalkthrough2019

If you don't have slack, but would like to be apart of this group.

  1. sign up for slack
  2. email me your username.

Useful Aids:

Python Lectures


Python 1:

Lecture

Problem set

Problem set solutions


Python 2:

Lecture

Problem set

Problem set solutions


Python 3:

Lecture

Problem set

Problem set solutions


Python 4:

Lecture

Problem set

Problem set solutions


Python 5:

Lecture

Problem set

Problem set solutions


Python 6:

Lecture

Problem set

Problem set solutions


Python 7:

Lecture

Problem set

Problem set solutions

Regular expressions tutorial

Regular expressions generator


Python 8:

Lecture

Problem set

Problem set solutions


Python 9:

Lecture

Problem set


Python 10:

Lecture

Problem set

About

This is a walkthrough of the PFB2018 course taught at CSHL.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages