New analysis functionality for the maternal and newborn health modules (intervention analysis) #1531
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…red or not (can be used for analysis). updates to care_of_women_during_pregnancy.py to use this function (and some small fixes)
…his function (and some small fixes)
…y to use this function (and some small fixes)
… after change to parameter type to fix test
tbhallett
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Dec 17, 2024
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Thanks @joehcollins ---
I can't comment on the logic/epi, but the coding seems fine.
I had one question about a 'framework' xlsx file being touched, and wanted to know if this was intentional or not.
resources/ResourceFile_Improved_Healthsystem_And_Healthcare_Seeking.xlsx
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(this PR contains changes defined in #1477 which should be merged before this PR)
This PR updates the functionality used to conduct analysis with the maternal and newborn health modules. The main changes in this PR include:
A new function in
pregnancy_helper_functions.pywhich is called whenever a MNH intervention should be delivered across the modules -check_int_deliverable. Through this function the probability a given intervention is delivered can be set externally (overriding the probability of delivery generated through consumable availability and other relevant quality parameters). This function preserves previous functionality used in 'whole service' analysis conducted previouslyPrevious functions determining wether consumables were available/other quality parameters would permit intervention delivery (
return_cons_availandcheck_emonc_signal_function_will_run) have been removedRedunant function logging met need of intervention delivery (
log_met_need) removedModules have been updated so they call
check_int_deliverableas required.Test files have been updated including new testing of
check_int_deliverableThese changes will be used to run the analysis for the upcoming MNH cohort model paper. Cohort model PR incoming.