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bclaremar authored Dec 22, 2023
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Many commonly used data sources are stored locally at UPPMAX. This page provides an index to pages where they are described in more detail.
Available databases:

[BLAST databases available locally](databases/blast.md)
[NCBI taxonomy databases]
[DIAMOND protein alignment databases]
[Reference genomes]
[1000-genome project]
[Simons Genome Diversity Project datasets]
[Other bioinformatics-oriented local data resources]
- [BLAST databases available locally](databases/blast.md)
- [NCBI taxonomy databases](databases/ncbi.md)
- [DIAMOND protein alignment databases](databases/diamond.md)
- [Reference genomes](databases/reference_genomes.md)
- [1000-genome project](databases/1000-genome_project.md)
- [Simons Genome Diversity Project datasets](databases/simons_genome.md)
- [Other bioinformatics-oriented local data resources](databases/other_local.md)

In order for you to access Swegen (or 1000 genomes) you must first send an email to [email protected] and ask for access. When they approve you, they will contact UPPMAX and we will grant access to Swegen.

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