This is the repository for the metabarcoding lab in the microbial eukaryote course at Uppsala University. The instructions are available here: https://uu-microbial-eukaryotes.github.io/Metabarcoding_lab/. It is created with bookdown.
Code-folding is possible thanks to Stackoverflow user Sébastien Rochette.
The data used in this lab comes from the Tara Oceans expedition, Malaspina expedition, Neotropical forest soils, and Lake Baikal. Data from the latter three studies was processed by Daniel Vaulot as part of metaPR2.
Suggestions and contributions are welcome!