Merge pull request #841 from UW-GAC/combined-prs-branch

Combined PRs

.github/workflows/ci.yml

@@ -140,6 +140,6 @@ jobs:
           python -m coverage report
 
       - name: Upload coverage to Codecov
-        uses: codecov/codecov-action@v4.6.0
+        uses: codecov/codecov-action@v5.0.7
         with:
           token: ${{ secrets.CODECOV_TOKEN }}

requirements/dev-requirements.txt

@@ -150,7 +150,7 @@ requests==2.32.3
     #   -c requirements/requirements.txt
     #   -c requirements/test-requirements.txt
     #   sphinx
-ruff==0.7.2
+ruff==0.7.4
     # via -r requirements/dev-requirements.in
 six==1.16.0
     # via
@@ -233,7 +233,7 @@ wcwidth==0.2.13
     # via prompt-toolkit
 websockets==12.0
     # via sphinx-autobuild
-werkzeug==3.1.2
+werkzeug==3.1.3
     # via -r requirements/dev-requirements.in
 
 # The following packages are considered to be unsafe in a requirements file:

requirements/requirements.txt

@@ -50,7 +50,7 @@ django==4.2.16
     #   django-picklefield
     #   django-simple-history
     #   django-tables2
-django-allauth==65.1.0
+django-allauth==65.2.0
     # via -r requirements/requirements.in
 django-anvil-consortium-manager @ git+https://github.com/UW-GAC/[email protected]
     # via -r requirements/requirements.in
@@ -97,7 +97,7 @@ idna==3.7
     # via requests
 jsonapi-requests==0.8.0
     # via -r requirements/requirements.in
-mysqlclient==2.2.5
+mysqlclient==2.2.6
     # via -r requirements/requirements.in
 networkx==3.1
     # via django-anvil-consortium-manager