Fix bug in header of TF info file

VIB-PSB · Dec 21, 2023 · 9f263a1 · 9f263a1
1 parent 6108980
commit 9f263a1
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/bin/MINIEX_makeInfoFile.py b/bin/MINIEX_makeInfoFile.py
@@ -41,7 +41,7 @@
 
 # Read in cluster (number) and tissue identity and merge into one string (e.g. "xylem-28")
 cluster_ids_df = pandas.read_csv(CLUSTER_IDS, sep='\t', header=None, names=["cluster_id", "tissue"], dtype={"cluster_id":"str", "tissue":"str"})
-cluster_ids_df["merged_cluster_name"] = cluster_ids_df['tissue'].astype(str) + '-' + cluster_ids_df.index.astype(str)
+cluster_ids_df["merged_cluster_name"] = cluster_ids_df['tissue'].astype(str) + '-' + cluster_ids_df['cluster_id'].astype(str)
 cluster_ids_df.set_index("cluster_id", inplace=True)
 
 ################################

diff --git a/example/OUTPUTS/regulons/miniexExample_TF_info_file.tsv b/example/OUTPUTS/regulons/miniexExample_TF_info_file.tsv
@@ -1,4 +1,4 @@
-	isTF_expressed	isTF_expressionRegulons	isTF_TFBSRegulons	isTF_finalRegulons	LRC-0	LRC-1	LRC-11	LRC-12	LRC-19	LRC-2	LRC-33	LRC-38	LRC-39	QC-40	atrichoblast-29	atrichoblast-37	columella-9	cortex-13	cortex-18	cortex-28	cortex-7	dividing-20	endodermis-14	endodermis-26	endodermis-32	epidermis-15	initials-10	initials-25	pericycle-16	pericycle-21	pericycle-3	pericycle-36	pericycle-4	pericycle-8	phloem-17	phloem-31	phloem-6	procambium-22	procambium-24	procambium-35	procambium-5	trichoblast-27	trichoblast-30	xylem-23	xylem-34
+	isTF_expressed	isTF_expressionRegulons	isTF_TFBSRegulons	isTF_finalRegulons	LRC-0	LRC-1	LRC-11	LRC-12	LRC-18	LRC-2	LRC-30	LRC-35	LRC-36	QC-37	atrichoblast-26	atrichoblast-34	columella-9	cortex-13	cortex-17	cortex-25	cortex-7	dividing-19	endodermis-14	endodermis-23	endodermis-29	epidermis-15	initials-10	initials-22.2	pericycle-16.0	pericycle-20	pericycle-3	pericycle-33	pericycle-4	pericycle-8	phloem-16.1	phloem-28	phloem-6	procambium-21	procambium-22.1	procambium-32	procambium-5	trichoblast-24	trichoblast-27	xylem-22.0	xylem-31
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