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1. tahiri-lab/aPhyloGeo-pipeline tahiri-lab/aPhyloGeo-pipeline Public

   Phylogeographic workflow using sliding-windows, RAxML-NG and FastTree

   Python 7

2. AI-for-Medicine AI-for-Medicine Public

   Convolutional neural network image classification and segmentation models; Risk models and survival estimators.

   Jupyter Notebook 1

3. ATAC-seq-MACS2 ATAC-seq-MACS2 Public

   Analysis of publicly available transcriptomic and epigenetic data to better describe the origin and role of a CD8+ T cell subpopulation

   Shell 1

4. Portfolio_Analysis Portfolio_Analysis Public

   We create a tool that analyses and visualises the major metrics of the portfolios across all of these areas, and determine which portfolio outperformed the others.

   Jupyter Notebook

5. COVID_cases_metorology_SHINY COVID_cases_metorology_SHINY Public

   Using Shiny to create interactive visualizations.

   R

6. plotly-dash-animation- plotly-dash-animation- Public

   An animation dashboard to show confirmed cases of SARS-COV-2 in different regions of Quebec.

   Python