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50 Open 58 Closed
50 Open 58 Closed
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Issues list

Issue with clipper installation
#119 opened Sep 17, 2024 by elisulvaran
4
min_width, max_width not taken into account
#118 opened Jun 20, 2024 by VandaLovejoy
Clipper does not output anything
#117 opened May 29, 2024 by ramirobarrantes
invalid contig chr3
#116 opened Jul 18, 2023 by tslzs
reverse_strand argument for seCLIP peaks?
#115 opened Jan 24, 2023 by arun-krishnaraj
Problem using Clipper with a cytoplasmic RBP that binds to spliced mRNA
#113 opened Dec 8, 2022 by Braulium
How to know the peaks called after clipper
#111 opened Sep 13, 2022 by ELMMA-FUNNY
3
why poisson_cutoff not actually used in call_peak.py since it is an additional significance filtering based on count
#110 opened Aug 31, 2022 by HUNNNGRY
A solution to core dumped and/or running too slow
#109 opened Aug 18, 2022 by YichaoOU
2
Runtime of CLIPer?
#107 opened May 6, 2022 by mhorlacher
3
CLIPper runs forever for empty bam files
#106 opened May 5, 2022 by algaebrown
@algaebrown
CLIPper complains file does not exist while it obviously exists
#105 opened Apr 30, 2022 by algaebrown
@byee4
2
clipper displays unusual help messages and can't be used
#103 opened Feb 8, 2022 by kerenzhou062
9
Main.py fails to import call_peaks.py, prints usage for peaksmodule.cc instead
#101 opened Jan 7, 2022 by lee-van
2
Multiple fragmented peaks where single peak expected
#98 opened Aug 5, 2021 by omarwagih
error with clipper and scipy version
#97 opened Jun 30, 2021 by byee4
Run test ERROR: python -m unittest discover ; The following error is reported. Can the clipper still be used normally
#94 opened Mar 29, 2021 by geng-lee
3
Invalid contig error
#93 opened Jan 22, 2021 by jalalsiddiqui
9
pip install clipper --user
#92 opened Jan 20, 2021 by jalalsiddiqui
2
Having trouble installing clipper
#91 opened Jan 19, 2021 by jalalsiddiqui
2
Clipper installation fails
#90 opened Nov 22, 2020 by ekfiagbedzi
3
Install Clipper via Conda
#89 opened Nov 10, 2020 by gpratt
1
'Segmentation fault' issue
#88 opened Oct 5, 2020 by dahun73
13
clipper -h fails after clean install
#86 opened Sep 30, 2020 by MattBrauer
6
clipper -h
#83 opened Aug 27, 2020 by junjunlab
2
ProTip! Updated in the last three days: updated:>2024-10-29.