fix symbolic link error on windows

Zilong-Li · Dec 21, 2024 · dd5ef52 · dd5ef52
1 parent 468d08e
commit dd5ef52
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diff --git a/configure b/configure
@@ -7,6 +7,8 @@ set -e
 HTSLIB_DIR="src/htslib-1.21"
 echo "Configuring HTSlib in $HTSLIB_DIR"
 cd $HTSLIB_DIR
+## copy file instead of symbolic linking
+cp htscodecs_bundled.mk htscodecs.mk 
 ./configure CFLAGS="-O2 -fPIC" 
 
 make libhts.a

diff --git a/src/htslib-1.21/configure b/src/htslib-1.21/configure
@@ -6952,7 +6952,7 @@ fi
 
 ac_config_files="$ac_config_files config.mk htslib.pc.tmp:htslib.pc.in"
 
-ac_config_links="$ac_config_links htscodecs.mk:$selected_htscodecs_mk"
+# ac_config_links="$ac_config_links htscodecs.mk:$selected_htscodecs_mk"
 
 
 if test "$srcdir" != .; then