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Test python versions
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arpanda committed Jul 22, 2024
1 parent 3b80b49 commit 7eea0ca
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions .github/workflows/python-test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -62,7 +62,7 @@ jobs:
run: |
cnvpytor -root test.pytor -pileup /mnt/gcs-bucket/bam/NA12877_S1.bam -v d
- name: run cnvpytor his, baf, call combined
- name: run cnvpytor his, baf
run: |
cnvpytor -root test.pytor -his 100000 -v d
cnvpytor -root test.pytor -baf 100000 -v d
Expand All @@ -77,7 +77,7 @@ jobs:
md5sum output_2D.tsv
[ "$(md5sum output_2D.tsv | awk '{ print $1 }')" == "c7a07af67cb38337f5df012cef304e66" ] && echo PASS || echo FAIL
- name: run cnvpytor call meanShift
- name: run cnvpytor meanShift call
run: |
cnvpytor -root test.pytor -partition 100000 -v d
cnvpytor -root test.pytor -call 100000 -v d > output_meanShift.tsv
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