test for python versions

abyzovlab · Jul 18, 2024 · 9c8bced · 9c8bced
1 parent 4fd8d6c
commit 9c8bced
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Showing 2 changed files with 11 additions and 6 deletions.
diff --git a/.github/workflows/python-test.yml b/.github/workflows/python-test.yml
@@ -1,4 +1,4 @@
-name: Python package
+name: Test for python versions
 
 on: [push, pull_request]
 
@@ -24,9 +24,10 @@ jobs:
         pip install pytest
         pip install -r requirements.txt
 
-    -name: Download pytor file
-      run: |
-        wget https://storage.googleapis.com/cnvpytor_data/HepG2_WGS.pytor
+    - name: Download pytor file
+        run: |
+          wget https://storage.googleapis.com/cnvpytor_data/HepG2_WGS.pytor -P ./downloads
+    
 
     - name: Run tests
       run: |

diff --git a/tests/test_viewer.py b/tests/test_viewer.py
@@ -3,8 +3,12 @@
 
 
 def test_module():
-    app = cnvpytor.Viewer(["HepG2_WGS.pytor"], bin_size=100000)
-    print(app.ls())
+    pytor_path = "./downloads/HepG2_WGS.pytor"
+    if Path(pytor_path).exists():
+        app = cnvpytor.Viewer(["HepG2_WGS.pytor"], bin_size=100000)
+        print(app.ls())
+    else:
+        print(f"Incorrect Path: {pytor_path}")
 
 
 if __name__ == "__main__":