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Re-structure nf-test test files #42

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Re-structure nf-test test files

Re-structure nf-test test files #42

Run time

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Job Run time
prettier
24s
nf-test-changes
6s
editorconfig
13s
pytest-changes
7s
nf-core-lint (amrfinderplus/run)
56s
nf-core-lint (amrfinderplus/update)
1m 4s
nf-core-lint (busco)
1m 10s
nf-core-lint (fastqc)
56s
nf-core-lint (glimpse2/concordance)
1m 11s
nf-core-lint (multiqc)
1m 12s
nf-core-lint (samtools/depth)
55s
nf-core-lint (sentieon/dnascope)
48s
nf-core-lint (snakemake)
1m 15s
nf-core-lint (umitools/group)
50s
nf-core-lint (wfmash)
48s
pytest (amrfinderplus/run, docker)
1m 45s
pytest (amrfinderplus/run, singularity)
2m 24s
pytest (amrfinderplus/run, conda)
3m 20s
pytest (amrfinderplus/update, docker)
1m 16s
pytest (amrfinderplus/update, singularity)
1m 26s
pytest (amrfinderplus/update, conda)
3m 17s
pytest (busco, docker)
3m 18s
pytest (busco, singularity)
3m 19s
pytest (busco, conda)
3m 17s
pytest (fastqc, docker)
3m 19s
pytest (fastqc, singularity)
3m 20s
pytest (fastqc, conda)
3m 18s
pytest (glimpse2/concordance, docker)
2m 5s
pytest (glimpse2/concordance, singularity)
2m 3s
pytest (glimpse2/concordance, conda)
3m 18s
pytest (multiqc, docker)
2m 2s
pytest (multiqc, singularity)
2m 2s
pytest (multiqc, conda)
3m 15s
pytest (samtools/depth, docker)
3m 6s
pytest (samtools/depth, singularity)
3m 10s
pytest (samtools/depth, conda)
3m 18s
pytest (sentieon/dnascope, docker)
1m 40s
pytest (sentieon/dnascope, singularity)
2m 4s
pytest (snakemake, docker)
1m 23s
pytest (snakemake, singularity)
1m 34s
pytest (snakemake, conda)
3m 17s
pytest (umitools/group, docker)
2m 46s
pytest (umitools/group, singularity)
2m 14s
pytest (umitools/group, conda)
3m 14s
pytest (wfmash, docker)
1m 13s
pytest (wfmash, singularity)
1m 9s
pytest (wfmash, conda)
2m 24s
nf-test (fastqc, docker)
43s
nf-test (fastqc, singularity)
42s
nf-test (fastqc, conda)
2m 20s
nf-test (snakemake, docker)
1m 3s
nf-test (snakemake, singularity)
56s
nf-test (snakemake, conda)
2m 2s
confirm-pass
1s
1h 40m 18s