nf-test famsa/tree (#4487) #63
adamrtalbottest.yml
on: push
nf-test-changes
5s
pytest-changes
7s
Matrix: nf-test
Matrix: nf-core-lint
Matrix: pytest
confirm-pass
0s
Annotations
372 errors and 69 warnings
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nf-test (bcftools/isec, docker)
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nf-test (bcftools/isec, singularity)
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nf-test (bcftools/call, docker)
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nf-test (bcftools/call, singularity)
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nf-test (bcftools/mpileup, docker)
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nf-test (bcftools/mpileup, singularity)
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nf-test (bcftools/view, singularity)
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nf-test (bcftools/concat, docker)
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nf-test (bcftools/isec, conda)
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nf-test (bcftools/concat, conda)
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nf-test (bcftools/view, docker)
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nf-test (bclconvert, singularity)
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nf-test (bcftools/mpileup, conda)
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nf-test (bcftools/concat, singularity)
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nf-test (bcftools/call, conda)
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nf-test (bcftools/reheader, docker)
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nf-test (bclconvert, docker)
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nf-test (bcftools/reheader, singularity)
Process completed with exit code 1.
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nf-test (bcftools/view, conda)
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nf-test (bcftools/reheader, conda)
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nf-test (samtools/idxstats, conda)
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nf-test (subworkflows/fastq_subsample_fq_salmon, singularity)
Process completed with exit code 1.
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nf-test (subworkflows/fastq_subsample_fq_salmon, conda)
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nf-test (subworkflows/fastq_subsample_fq_salmon, docker)
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nf-test (svanalyzer/svbenchmark, singularity)
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nf-test (svanalyzer/svbenchmark, docker)
Process completed with exit code 1.
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pytest (bedtools/maskfasta, conda)
Process completed with exit code 1.
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pytest (bedtools/maskfasta, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 6044:1F14:13D069:28A5F7:6570830B.
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pytest (bedtools/maskfasta, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/maskfasta, conda)
Invalid URL
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pytest (bedtools/maskfasta, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (cnvkit/antitarget, conda)
Process completed with exit code 1.
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pytest (cnvkit/antitarget, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 8098:11A8:16E8F2:17A6D4:657083EB.
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pytest (cnvkit/antitarget, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (cnvkit/antitarget, conda)
Invalid URL
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pytest (cnvkit/antitarget, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/maskfasta, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 8828:08E8:BED77:18A43B:65708311.
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pytest (bedtools/maskfasta, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/maskfasta, docker)
Invalid URL
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pytest (bedtools/maskfasta, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/maskfasta, docker)
Process completed with exit code 1.
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pytest (cnvkit/access, conda)
Process completed with exit code 1.
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pytest (cnvkit/access, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID C680:63D0:17E467:18A08E:6570838B.
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pytest (cnvkit/access, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (cnvkit/access, conda)
Invalid URL
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pytest (cnvkit/access, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/sort, singularity)
Process completed with exit code 1.
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pytest (bedtools/sort, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID A480:0749:10B7DF:2282F1:65708364.
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pytest (bedtools/sort, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/sort, singularity)
Invalid URL
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pytest (bedtools/sort, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/makewindows, singularity)
Process completed with exit code 1.
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pytest (bedtools/makewindows, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 4432:8DAA:147B28:29FEE1:6570830B.
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pytest (bedtools/makewindows, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/makewindows, singularity)
Invalid URL
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pytest (bedtools/makewindows, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/split, conda)
Process completed with exit code 1.
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pytest (bedtools/split, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 94C0:0C2E:A685F:155C19:65708360.
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pytest (bedtools/split, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/split, conda)
Invalid URL
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pytest (bedtools/split, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/multiinter, singularity)
Process completed with exit code 1.
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pytest (bedtools/multiinter, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID F040:81BF:1474DC:152D35:6570832F.
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pytest (bedtools/multiinter, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/multiinter, singularity)
Invalid URL
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pytest (bedtools/multiinter, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/multiinter, docker)
Process completed with exit code 1.
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pytest (bedtools/multiinter, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 8840:661C:127089:25F33B:6570832F.
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pytest (bedtools/multiinter, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/multiinter, docker)
Invalid URL
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pytest (bedtools/multiinter, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/slop, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 5880:864B:D0F42:1AED2B:65708346.
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pytest (bedtools/slop, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/slop, conda)
Invalid URL
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pytest (bedtools/slop, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/slop, conda)
Process completed with exit code 1.
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pytest (bedtools/unionbedg, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID AC00:19F8:C8AC7:19D63B:65708375.
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pytest (bedtools/unionbedg, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/unionbedg, conda)
Invalid URL
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pytest (bedtools/unionbedg, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/unionbedg, conda)
Process completed with exit code 1.
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pytest (bedtools/merge, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 58C8:77DF:A3EAA:1542AD:6570831B.
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pytest (bedtools/merge, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/merge, docker)
Invalid URL
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pytest (bedtools/merge, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/merge, docker)
Process completed with exit code 1.
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pytest (bedtools/multiinter, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID A000:3BDC:11A7FA:245E0B:65708320.
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pytest (bedtools/multiinter, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/multiinter, conda)
Invalid URL
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pytest (bedtools/multiinter, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/multiinter, conda)
Process completed with exit code 1.
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pytest (bedtools/sort, conda)
Process completed with exit code 1.
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pytest (bedtools/sort, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID D868:944B:136A8D:1423A9:65708362.
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pytest (bedtools/sort, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/sort, conda)
Invalid URL
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pytest (bedtools/sort, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (cnvkit/access, singularity)
Process completed with exit code 1.
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pytest (cnvkit/access, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 1440:5EEA:C4F1F:193F13:65708422.
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pytest (cnvkit/access, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (cnvkit/access, singularity)
Invalid URL
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pytest (cnvkit/access, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/subtract, conda)
Process completed with exit code 1.
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pytest (bedtools/subtract, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 6C00:452E:13B027:146B1E:65708375.
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pytest (bedtools/subtract, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/subtract, conda)
Invalid URL
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pytest (bedtools/subtract, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/subtract, docker)
Process completed with exit code 1.
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pytest (bedtools/subtract, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 3400:87D5:11892A:1241A6:65708377.
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pytest (bedtools/subtract, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/subtract, docker)
Invalid URL
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pytest (bedtools/subtract, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/shift, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 9D00:3EB1:A80FD:15C74C:6570832E.
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pytest (bedtools/shift, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/shift, conda)
Invalid URL
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pytest (bedtools/shift, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/shift, conda)
Process completed with exit code 1.
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pytest (bedtools/slop, docker)
Process completed with exit code 1.
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pytest (bedtools/slop, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 0B40:2CA9:A8432:15CDA1:65708358.
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pytest (bedtools/slop, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/slop, docker)
Invalid URL
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pytest (bedtools/slop, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/slop, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID BA40:4BFC:A319F:14F73E:6570835E.
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pytest (bedtools/slop, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/slop, singularity)
Invalid URL
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pytest (bedtools/slop, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/slop, singularity)
Process completed with exit code 1.
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pytest (bedtools/merge, singularity)
Process completed with exit code 1.
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pytest (bedtools/merge, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 28B8:1ED5:9CB12:145765:65708322.
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pytest (bedtools/merge, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/merge, singularity)
Invalid URL
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pytest (bedtools/merge, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/maskfasta, singularity)
Process completed with exit code 1.
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pytest (bedtools/maskfasta, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID CC80:6441:84F74:1120CC:6570830C.
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pytest (bedtools/maskfasta, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/maskfasta, singularity)
Invalid URL
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pytest (bedtools/maskfasta, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/unionbedg, docker)
Process completed with exit code 1.
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pytest (bedtools/unionbedg, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 4F80:6B4B:CF4F0:1AC306:65708377.
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pytest (bedtools/unionbedg, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/unionbedg, docker)
Invalid URL
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pytest (bedtools/unionbedg, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/shift, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID D7C0:34B0:120C88:25263E:65708342.
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pytest (bedtools/shift, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/shift, docker)
Invalid URL
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pytest (bedtools/shift, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/shift, docker)
Process completed with exit code 1.
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pytest (bedtools/split, docker)
Process completed with exit code 1.
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pytest (bedtools/split, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID D440:55A0:13ADFC:146652:65708367.
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pytest (bedtools/split, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/split, docker)
Invalid URL
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pytest (bedtools/split, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/split, singularity)
Process completed with exit code 1.
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pytest (bedtools/split, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 1400:74A4:C90B3:19F5C9:65708366.
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pytest (bedtools/split, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/split, singularity)
Invalid URL
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pytest (bedtools/split, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/merge, conda)
Process completed with exit code 1.
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pytest (bedtools/merge, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 0400:65F9:90970:12942F:65708319.
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pytest (bedtools/merge, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/merge, conda)
Invalid URL
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pytest (bedtools/merge, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/sort, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID C3C0:203D:142820:14E17A:65708363.
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pytest (bedtools/sort, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/sort, docker)
Invalid URL
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pytest (bedtools/sort, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/sort, docker)
Process completed with exit code 1.
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pytest (bedtools/shift, singularity)
Process completed with exit code 1.
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pytest (bedtools/shift, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID DC40:7D48:C2D12:192498:65708355.
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pytest (bedtools/shift, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
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pytest (bedtools/shift, singularity)
Invalid URL
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pytest (bedtools/shift, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
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pytest (bedtools/unionbedg, singularity)
Process completed with exit code 1.
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|
pytest (bedtools/unionbedg, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID B440:36D4:8F09D:126A33:6570837D.
|
|
pytest (bedtools/unionbedg, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (bedtools/unionbedg, singularity)
Invalid URL
|
|
pytest (bedtools/unionbedg, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/access, docker)
Process completed with exit code 1.
|
|
pytest (cnvkit/access, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 0400:7BF5:B5232:176744:657083D7.
|
|
pytest (cnvkit/access, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/access, docker)
Invalid URL
|
|
pytest (cnvkit/access, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/antitarget, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 5808:0E09:C0282:18A777:65708443.
|
|
pytest (cnvkit/antitarget, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/antitarget, singularity)
Invalid URL
|
|
pytest (cnvkit/antitarget, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/antitarget, singularity)
Process completed with exit code 1.
|
|
pytest (cnvkit/antitarget, docker)
Process completed with exit code 1.
|
|
pytest (cnvkit/antitarget, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 9028:45DE:D6D01:1BAD86:6570842B.
|
|
pytest (cnvkit/antitarget, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/antitarget, docker)
Invalid URL
|
|
pytest (cnvkit/antitarget, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/batch, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 5068:22C2:157D11:2C206B:65708452.
|
|
pytest (cnvkit/batch, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/batch, conda)
Invalid URL
|
|
pytest (cnvkit/batch, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/batch, conda)
Process completed with exit code 1.
|
|
pytest (bedtools/subtract, singularity)
Process completed with exit code 1.
|
|
pytest (bedtools/subtract, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID E480:67A3:C01D4:18D668:65708374.
|
|
pytest (bedtools/subtract, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (bedtools/subtract, singularity)
Invalid URL
|
|
pytest (bedtools/subtract, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/batch, docker)
Process completed with exit code 1.
|
|
pytest (cnvkit/batch, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID B818:8DAA:17AB9B:308BB5:65708492.
|
|
pytest (cnvkit/batch, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/batch, docker)
Invalid URL
|
|
pytest (cnvkit/batch, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/batch, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 1088:3ED5:1923B1:336B47:657084FA.
|
|
pytest (cnvkit/batch, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/batch, singularity)
Invalid URL
|
|
pytest (cnvkit/batch, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/batch, singularity)
Process completed with exit code 1.
|
|
pytest (cnvkit/call, singularity)
Process completed with exit code 1.
|
|
pytest (cnvkit/call, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 2380:8116:188153:325B5F:65708667.
|
|
pytest (cnvkit/call, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/call, singularity)
Invalid URL
|
|
pytest (cnvkit/call, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/call, docker)
Process completed with exit code 1.
|
|
pytest (cnvkit/call, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 8C80:64D6:D83EF:1BD719:65708679.
|
|
pytest (cnvkit/call, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/call, docker)
Invalid URL
|
|
pytest (cnvkit/call, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/call, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID BBC0:0967:19A170:348960:6570862F.
|
|
pytest (cnvkit/call, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/call, conda)
Invalid URL
|
|
pytest (cnvkit/call, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/call, conda)
Process completed with exit code 1.
|
|
pytest (cnvkit/genemetrics, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID E8C0:67A3:176E80:306210:657089D4.
|
|
pytest (cnvkit/genemetrics, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/genemetrics, conda)
Invalid URL
|
|
pytest (cnvkit/genemetrics, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/genemetrics, conda)
Process completed with exit code 1.
|
|
pytest (cnvkit/export, singularity)
Process completed with exit code 1.
|
|
pytest (cnvkit/export, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 8C80:0D35:2067A3:428745:657089E3.
|
|
pytest (cnvkit/export, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/export, singularity)
Invalid URL
|
|
pytest (cnvkit/export, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/genemetrics, singularity)
Process completed with exit code 1.
|
|
pytest (cnvkit/genemetrics, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID DC10:3ED5:234E4D:484862:65708A11.
|
|
pytest (cnvkit/genemetrics, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/genemetrics, singularity)
Invalid URL
|
|
pytest (cnvkit/genemetrics, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/export, docker)
Process completed with exit code 1.
|
|
pytest (cnvkit/export, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID D380:035A:1E87F4:3EBD87:657089BD.
|
|
pytest (cnvkit/export, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/export, docker)
Invalid URL
|
|
pytest (cnvkit/export, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/export, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 68C0:1171:1529D2:2B81E2:657089AE.
|
|
pytest (cnvkit/export, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/export, conda)
Invalid URL
|
|
pytest (cnvkit/export, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/export, conda)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec, singularity)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 5D00:11A8:1FEFF9:20F936:65708AD5.
|
|
pytest (controlfreec/freec, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec, singularity)
Invalid URL
|
|
pytest (controlfreec/freec, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/reference, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID D400:5A12:174B48:302375:65708A44.
|
|
pytest (cnvkit/reference, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/reference, docker)
Invalid URL
|
|
pytest (cnvkit/reference, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/reference, docker)
Process completed with exit code 1.
|
|
pytest (cnvkit/target, docker)
Process completed with exit code 1.
|
|
pytest (cnvkit/target, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 5440:2198:1D173E:1E1B0B:65708A77.
|
|
pytest (cnvkit/target, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/target, docker)
Invalid URL
|
|
pytest (cnvkit/target, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/assesssignificance, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID D430:19F8:188AC3:329F10:65708A80.
|
|
pytest (controlfreec/assesssignificance, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
|
|
pytest (controlfreec/assesssignificance, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/assesssignificance, singularity)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec2bed, conda)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec2bed, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 4C20:8C5E:1F29E3:203624:65708AF8.
|
|
pytest (controlfreec/freec2bed, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec2bed, conda)
Invalid URL
|
|
pytest (controlfreec/freec2bed, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/reference, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 6400:65F9:158211:2C3602:65708A15.
|
|
pytest (cnvkit/reference, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/reference, conda)
Invalid URL
|
|
pytest (cnvkit/reference, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/reference, conda)
Process completed with exit code 1.
|
|
pytest (cnvkit/genemetrics, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 3BC0:3D55:152BD7:2BE23A:657089F0.
|
|
pytest (cnvkit/genemetrics, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/genemetrics, docker)
Invalid URL
|
|
pytest (cnvkit/genemetrics, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/genemetrics, docker)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec2bed, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 1700:0843:16F937:2F9C26:65708B03.
|
|
pytest (controlfreec/freec2bed, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec2bed, singularity)
Invalid URL
|
|
pytest (controlfreec/freec2bed, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec2bed, singularity)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec2circos, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 0400:01B5:1C092A:39FD9F:65708B0A.
|
|
pytest (controlfreec/freec2circos, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec2circos, singularity)
Invalid URL
|
|
pytest (controlfreec/freec2circos, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec2circos, singularity)
Process completed with exit code 1.
|
|
pytest (cnvkit/target, singularity)
Process completed with exit code 1.
|
|
pytest (cnvkit/target, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID E000:71CB:20C1DE:434449:65708A78.
|
|
pytest (cnvkit/target, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/target, singularity)
Invalid URL
|
|
pytest (cnvkit/target, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/makegraph, conda)
Process completed with exit code 1.
|
|
pytest (controlfreec/makegraph, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID F840:5694:203870:4256BE:65708B3D.
|
|
pytest (controlfreec/makegraph, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/makegraph, conda)
Invalid URL
|
|
pytest (controlfreec/makegraph, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/assesssignificance, conda)
Process completed with exit code 1.
|
|
pytest (controlfreec/assesssignificance, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 6100:33CE:1D511C:3C77EE:65708A7D.
|
|
pytest (controlfreec/assesssignificance, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/assesssignificance, conda)
Invalid URL
|
|
pytest (controlfreec/assesssignificance, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/reference, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID E8C0:203D:1C72AE:1D782B:65708A49.
|
|
pytest (cnvkit/reference, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/reference, singularity)
Invalid URL
|
|
pytest (cnvkit/reference, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/reference, singularity)
Process completed with exit code 1.
|
|
pytest (controlfreec/makegraph2, docker)
Process completed with exit code 1.
|
|
pytest (controlfreec/makegraph2, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 6818:64D6:162118:2D943F:65708B6C.
|
|
pytest (controlfreec/makegraph2, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/makegraph2, docker)
Invalid URL
|
|
pytest (controlfreec/makegraph2, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/makegraph, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 2B80:65F9:179861:307FEC:65708B4C.
|
|
pytest (controlfreec/makegraph, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/makegraph, docker)
Invalid URL
|
|
pytest (controlfreec/makegraph, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/makegraph, docker)
Process completed with exit code 1.
|
|
pytest (controlfreec/assesssignificance, docker)
Process completed with exit code 1.
|
|
pytest (controlfreec/assesssignificance, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 9080:0E7F:206082:216A77:65708AA5.
|
|
pytest (controlfreec/assesssignificance, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/assesssignificance, docker)
Invalid URL
|
|
pytest (controlfreec/assesssignificance, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec, docker)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 9420:36D4:15C034:2CC157:65708ABF.
|
|
pytest (controlfreec/freec, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec, docker)
Invalid URL
|
|
pytest (controlfreec/freec, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/makegraph2, singularity)
Process completed with exit code 1.
|
|
pytest (controlfreec/makegraph2, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 4C20:9D97:19D7C1:35563C:65708B7F.
|
|
pytest (controlfreec/makegraph2, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/makegraph2, singularity)
Invalid URL
|
|
pytest (controlfreec/makegraph2, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 2040:046D:15BD79:2CC6A4:65708ABD.
|
|
pytest (controlfreec/freec, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec, conda)
Invalid URL
|
|
pytest (controlfreec/freec, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec, conda)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec2circos, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 3A00:5EE9:17C831:30C880:65708B30.
|
|
pytest (controlfreec/freec2circos, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec2circos, conda)
Invalid URL
|
|
pytest (controlfreec/freec2circos, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec2circos, conda)
Process completed with exit code 1.
|
|
pytest (controlfreec/makegraph, singularity)
Process completed with exit code 1.
|
|
pytest (controlfreec/makegraph, singularity)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 84A0:81BF:1EAD30:1FBFBB:65708B5C.
|
|
pytest (controlfreec/makegraph, singularity)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/makegraph, singularity)
Invalid URL
|
|
pytest (controlfreec/makegraph, singularity)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec2bed, docker)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec2bed, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID 0400:8C5E:1F39E3:2046D1:65708B06.
|
|
pytest (controlfreec/freec2bed, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec2bed, docker)
Invalid URL
|
|
pytest (controlfreec/freec2bed, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/target, conda)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID DD00:57CB:151921:2BCCAB:65708A5F.
|
|
pytest (cnvkit/target, conda)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (cnvkit/target, conda)
Invalid URL
|
|
pytest (cnvkit/target, conda)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (cnvkit/target, conda)
Process completed with exit code 1.
|
|
pytest (controlfreec/freec2circos, docker)
Could not retrieve Nextflow release matching .
API rate limit exceeded for installation ID 30692499. If you reach out to GitHub Support for help, please include the request ID FC00:2198:1E0F55:1F1B31:65708B36.
|
|
pytest (controlfreec/freec2circos, docker)
Could not parse the download URL
Cannot read properties of undefined (reading 'filter')
|
|
pytest (controlfreec/freec2circos, docker)
Invalid URL
|
|
pytest (controlfreec/freec2circos, docker)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
|
|
pytest (controlfreec/freec2circos, docker)
Process completed with exit code 1.
|
|
confirm-pass
Process completed with exit code 1.
|
|
pytest (bedtools/maskfasta, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/antitarget, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/maskfasta, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/access, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/sort, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/makewindows, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/split, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/multiinter, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/multiinter, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/slop, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/unionbedg, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/merge, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/multiinter, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/sort, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/access, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/subtract, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/subtract, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/shift, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/slop, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/slop, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/merge, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/maskfasta, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/unionbedg, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/shift, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/split, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/split, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/merge, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/sort, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/shift, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/unionbedg, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/access, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/antitarget, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/antitarget, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/batch, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (bedtools/subtract, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/batch, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/batch, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/call, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/call, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/call, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/genemetrics, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/export, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/genemetrics, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/export, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/export, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/reference, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/target, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/assesssignificance, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec2bed, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/reference, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/genemetrics, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec2bed, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec2circos, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/target, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/makegraph, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/assesssignificance, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/reference, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/makegraph2, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/makegraph, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/assesssignificance, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/makegraph2, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec2circos, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/makegraph, singularity)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec2bed, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (cnvkit/target, conda)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|
|
pytest (controlfreec/freec2circos, docker)
No files were found with the provided path: /home/runner/pytest_workflow_*/*/.nextflow.log
/home/runner/pytest_workflow_*/*/log.out
/home/runner/pytest_workflow_*/*/log.err
/home/runner/pytest_workflow_*/*/work
!/home/runner/pytest_workflow_*/*/work/conda
!/home/runner/pytest_workflow_*/*/work/singularity
!/home/runner/work/modules/modules/.singularity. No artifacts will be uploaded.
|