Blastdbcmd new module (#5482) #70
adamrtalbottest.yml
on: push
Matrix: nf-test
Waiting for pending jobs
Matrix: nf-core-lint
Waiting for pending jobs
Matrix: pytest
confirm-pass
4s
Annotations
315 errors and 3 warnings
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pytest (arriba/arriba, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (arriba/arriba, conda)
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pytest (ashlar, conda)
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pytest (arriba/arriba, singularity)
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pytest (ashlar, docker)
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pytest (cellrangerarc/count, singularity)
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pytest (cellrangerarc/count, docker)
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pytest (ashlar, singularity)
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pytest (ensemblvep/filtervep, conda)
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pytest (ensemblvep/filtervep, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (ensemblvep/filtervep, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (fqtk, conda)
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pytest (fqtk, singularity)
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pytest (gatk/unifiedgenotyper, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk/unifiedgenotyper, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (fqtk, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk/unifiedgenotyper, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/applyvqsr, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/applyvqsr, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/applyvqsr, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/calculatecontamination, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/calculatecontamination, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/calculatecontamination, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/calibratedragstrmodel, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/calibratedragstrmodel, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/cnnscorevariants, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/calibratedragstrmodel, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/cnnscorevariants, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/collectreadcounts, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/collectreadcounts, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/collectreadcounts, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/collectsvevidence, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/collectsvevidence, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/composestrtablefile, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/composestrtablefile, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/collectsvevidence, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/condensedepthevidence, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/composestrtablefile, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/condensedepthevidence, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/condensedepthevidence, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createreadcountpanelofnormals, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createreadcountpanelofnormals, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createreadcountpanelofnormals, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createsequencedictionary, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createsequencedictionary, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createsomaticpanelofnormals, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createsequencedictionary, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createsomaticpanelofnormals, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/createsomaticpanelofnormals, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/determinegermlinecontigploidy, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/fastqtosam, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filterintervals, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/fastqtosam, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/fastqtosam, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filterintervals, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filtermutectcalls, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filterintervals, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filtermutectcalls, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filtervarianttranches, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filtervarianttranches, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/gatherbqsrreports, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/gatherbqsrreports, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/gatherbqsrreports, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filtervarianttranches, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/filtermutectcalls, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/gatherpileupsummaries, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/gatherpileupsummaries, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/gatherpileupsummaries, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/genotypegvcfs, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/germlinecnvcaller, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/genotypegvcfs, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/getpileupsummaries, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/genotypegvcfs, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/germlinecnvcaller, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/getpileupsummaries, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/indexfeaturefile, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/getpileupsummaries, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/indexfeaturefile, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/indexfeaturefile, singularity)
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pytest (gatk4/intervallisttobed, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/intervallisttobed, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/intervallisttobed, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/learnreadorientationmodel, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/learnreadorientationmodel, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/intervallisttools, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/intervallisttools, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/intervallisttools, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/mergebamalignment, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/learnreadorientationmodel, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/leftalignandtrimvariants, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/leftalignandtrimvariants, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/leftalignandtrimvariants, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/mergemutectstats, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/mergebamalignment, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/mergebamalignment, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/postprocessgermlinecnvcalls, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/mergemutectstats, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/mergemutectstats, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/postprocessgermlinecnvcalls, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/preprocessintervals, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/preprocessintervals, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/preprocessintervals, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/printreads, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/printreads, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/printreads, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/printsvevidence, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/printsvevidence, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/printsvevidence, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/samtofastq, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/revertsam, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/revertsam, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/revertsam, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/shiftfasta, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/samtofastq, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/shiftfasta, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/samtofastq, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/shiftfasta, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/sitedepthtobaf, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/sitedepthtobaf, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/sitedepthtobaf, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/splitcram, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/splitcram, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/splitcram, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/splitintervals, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/splitintervals, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/splitintervals, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/variantfiltration, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/variantfiltration, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/variantfiltration, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/variantrecalibrator, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/variantrecalibrator, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4spark/baserecalibrator, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4/variantrecalibrator, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4spark/baserecalibrator, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gatk4spark/baserecalibrator, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gfaffix, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gfaffix, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gfaffix, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gsea/gsea, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gsea/gsea, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/dedup, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/dedup, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (gsea/gsea, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/flip, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/flip, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/flip, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/dedup, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/merge, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/merge, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/parse, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/merge, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/restrict, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/parse, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/parse, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/restrict, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/select, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/select, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/restrict, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/stats, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/sort, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/sort, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/sort, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/select, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (pairtools/stats, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (peka, docker)
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pytest (pairtools/stats, singularity)
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pytest (peka, singularity)
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pytest (peka, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (proteus/readproteingroups, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (proteus/readproteingroups, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (proteus/readproteingroups, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/collatefastq, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/depth, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/collatefastq, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/collatefastq, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/depth, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/depth, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/dict, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/dict, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/dict, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/fasta, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/fasta, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/fasta, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/getrg, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/import, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/getrg, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/getrg, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/markdup, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/import, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/import, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/markdup, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/markdup, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/reheader, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/reheader, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/applyvarcal, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/reheader, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/applyvarcal, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/reheader, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/applyvarcal, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/applyvarcal, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/reheader, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (samtools/reheader, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwaindex, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwaindex, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/datametrics, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/datametrics, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/datametrics, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/datametrics, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwaindex, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwaindex, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwamem, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwamem, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwamem, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/bwamem, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dedup, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dedup, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dedup, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dedup, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnamodelapply, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnamodelapply, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnamodelapply, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnamodelapply, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnascope, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnascope, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnascope, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/dnascope, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/gvcftyper, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/gvcftyper, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/haplotyper, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/haplotyper, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/haplotyper, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/haplotyper, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/gvcftyper, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/gvcftyper, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnfilter, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnfilter, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/readwriter, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/readwriter, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/readwriter, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/readwriter, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnfilter, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnfilter, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnscope, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnscope, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/varcal, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/varcal, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnhaplotyper2, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnhaplotyper2, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnhaplotyper2, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnhaplotyper2, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/varcal, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/varcal, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnscope, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/tnscope, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/wgsmetrics, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/wgsmetrics, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/fx2tab, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/fx2tab, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/fx2tab, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/fx2tab, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/fx2tab, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/fx2tab, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/tab2fx, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/tab2fx, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/wgsmetrics, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/tab2fx, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/tab2fx, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sentieon/wgsmetrics, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/tab2fx, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (seqkit/tab2fx, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sgdemux, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (shapeit5/ligate, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sgdemux, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (shapeit5/ligate, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (shapeit5/ligate, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (shapeit5/ligate, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sgdemux, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sgdemux, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (shapeit5/ligate, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (shapeit5/ligate, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sgdemux, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (sgdemux, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nextflow_pipeline, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nextflow_pipeline, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nextflow_pipeline, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nextflow_pipeline, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/vcf_phase_shapeit5, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/vcf_phase_shapeit5, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/vcf_phase_shapeit5, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nextflow_pipeline, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/vcf_phase_shapeit5, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nextflow_pipeline, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nfcore_pipeline, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nfcore_pipeline, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nfcore_pipeline, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nfcore_pipeline, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nfcore_pipeline, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/utils_nfcore_pipeline, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (ucsc/gtftogenepred, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (ucsc/gtftogenepred, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (ucsc/gtftogenepred, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (ucsc/gtftogenepred, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/vcf_phase_shapeit5, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (subworkflows/vcf_phase_shapeit5, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (umitools/group, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (umitools/group, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (umitools/group, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (umitools/group, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (umitools/group, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (ucsc/gtftogenepred, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (umitools/group, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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pytest (ucsc/gtftogenepred, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
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confirm-pass
Process completed with exit code 1.
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Run tests
Strategy expansion exceeded 256 results for job 'nf-core-lint'
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Run tests
Strategy expansion exceeded 256 results for job 'nf-test'
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nf-test-changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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pytest-changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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