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115 Open 213 Closed
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Issues list

InvalidIndexError: (slice(None, None, None), 30751) while using coverage plot
#493 opened Oct 25, 2024 by yojetsharma
Error in rule get_search_space: jobid: 11 second
#492 opened Oct 24, 2024 by vcleon88
Error in rule get_search_space: jobid: 11
#491 opened Oct 24, 2024 by vcleon88
What's the meaning of the suffix of output eregulon's name like "+/+" or "+/-" ?
#488 opened Oct 19, 2024 by XinWang19
1
plot_rss problem
#487 opened Oct 18, 2024 by GGboy-Zzz
1
adata.raw overwritten with normalized counts in SCENIC+ pipeline
#484 opened Oct 17, 2024 by cjiang310437
1
Error in running grn_inference region_to_gene
#481 opened Oct 15, 2024 by Longity
SCENIC+ fails to install due to pybigtools build failure
#479 opened Oct 10, 2024 by dmalzl
4
Issue with pycisTopic on human cerebellum single-cell multiome data on HPC Fedora
#475 opened Oct 2, 2024 by Stack7
1
Problem with TSS
#474 opened Sep 25, 2024 by ReviewBrandLab2024
1
scenicplus prepare_data prepare_menr error
#470 opened Sep 18, 2024 by Yiming-Huang-neuron
5
Error when running SnakeMake
#468 opened Sep 17, 2024 by gilgolan73
15
Problems with importing for new, Tutorial: Perturbation simulation
#467 opened Sep 12, 2024 by finncreeggan
1
Re-calculating enrichment scores after filtering eRegulons and "+"/ "-" eRegulon signs
#466 opened Sep 12, 2024 by maithermbarros
5
Creating custom cistarget database
#462 opened Sep 7, 2024 by zznx
Issue while Installing on Fedora HPC Using conda environment
#461 opened Sep 4, 2024 by Stack7
3
Pycistopic Temporary Fragment file cannot be found
#458 opened Sep 4, 2024 by yrsong001
1
SCENIC+ crashed in tf_to_gene step
#454 opened Aug 24, 2024 by kangjiajinlong
3
Region set, scores.feather and NameError: name 'run_cgs_models_mallet
#451 opened Aug 21, 2024 by strawberry098
3
ValueError: No objects to concatenate during motif_enrichment_dem Execution
#449 opened Aug 16, 2024 by OjongTabi
1
How can I convert a SCENIC+ object to a loom file?
#448 opened Aug 14, 2024 by uqnsarke
Count matrix to cistopic link broken + scalability to large datasets question
#447 opened Aug 10, 2024 by wgao688
4
pyscenic dependency
#441 opened Jul 31, 2024 by wangjiawen2013
1
error runing scenic+
#438 opened Jul 24, 2024 by ACAIDI
1
Data base
#435 opened Jul 19, 2024 by SteveTur
3
ProTip! What’s not been updated in a month: updated:<2024-09-25.