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add new test files based on nf-core/eager output
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aidaanva committed Mar 27, 2023
1 parent 529c28d commit 77e0ebb
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Showing 3 changed files with 48 additions and 0 deletions.
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1073 + 0 in total (QC-passed reads + QC-failed reads)
1073 + 0 primary
0 + 0 secondary
0 + 0 supplementary
0 + 0 duplicates
0 + 0 primary duplicates
1073 + 0 mapped (100.00% : N/A)
1073 + 0 primary mapped (100.00% : N/A)
0 + 0 paired in sequencing
0 + 0 read1
0 + 0 read2
0 + 0 properly paired (N/A : N/A)
0 + 0 with itself and mate mapped
0 + 0 singletons (N/A : N/A)
0 + 0 with mate mapped to a different chr
0 + 0 with mate mapped to a different chr (mapQ>=5)
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@@ -0,0 +1,16 @@
10184 + 0 in total (QC-passed reads + QC-failed reads)
10184 + 0 primary
0 + 0 secondary
0 + 0 supplementary
0 + 0 duplicates
0 + 0 primary duplicates
1246 + 0 mapped (12.23% : N/A)
1246 + 0 primary mapped (12.23% : N/A)
0 + 0 paired in sequencing
0 + 0 read1
0 + 0 read2
0 + 0 properly paired (N/A : N/A)
0 + 0 with itself and mate mapped
0 + 0 singletons (N/A : N/A)
0 + 0 with mate mapped to a different chr
0 + 0 with mate mapped to a different chr (mapQ>=5)
16 changes: 16 additions & 0 deletions Test/JK2782_JK2782_TGGCCGATCAACGA_L1_filtered.flagstat
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
1144 + 0 in total (QC-passed reads + QC-failed reads)
1144 + 0 primary
0 + 0 secondary
0 + 0 supplementary
0 + 0 duplicates
0 + 0 primary duplicates
1144 + 0 mapped (100.00% : N/A)
1144 + 0 primary mapped (100.00% : N/A)
0 + 0 paired in sequencing
0 + 0 read1
0 + 0 read2
0 + 0 properly paired (N/A : N/A)
0 + 0 with itself and mate mapped
0 + 0 singletons (N/A : N/A)
0 + 0 with mate mapped to a different chr
0 + 0 with mate mapped to a different chr (mapQ>=5)

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