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add new test files based on nf-core/eager output
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16 changes: 16 additions & 0 deletions
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Test/JK2782_JK2782_TGGCCGATCAACGA_L1_JK2782_TGGCCGATCAACGA_dedupped.flagstat
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,16 @@ | ||
1073 + 0 in total (QC-passed reads + QC-failed reads) | ||
1073 + 0 primary | ||
0 + 0 secondary | ||
0 + 0 supplementary | ||
0 + 0 duplicates | ||
0 + 0 primary duplicates | ||
1073 + 0 mapped (100.00% : N/A) | ||
1073 + 0 primary mapped (100.00% : N/A) | ||
0 + 0 paired in sequencing | ||
0 + 0 read1 | ||
0 + 0 read2 | ||
0 + 0 properly paired (N/A : N/A) | ||
0 + 0 with itself and mate mapped | ||
0 + 0 singletons (N/A : N/A) | ||
0 + 0 with mate mapped to a different chr | ||
0 + 0 with mate mapped to a different chr (mapQ>=5) |
16 changes: 16 additions & 0 deletions
16
Test/JK2782_JK2782_TGGCCGATCAACGA_L1_JK2782_TGGCCGATCAACGA_mapping_raw.flagstat
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,16 @@ | ||
10184 + 0 in total (QC-passed reads + QC-failed reads) | ||
10184 + 0 primary | ||
0 + 0 secondary | ||
0 + 0 supplementary | ||
0 + 0 duplicates | ||
0 + 0 primary duplicates | ||
1246 + 0 mapped (12.23% : N/A) | ||
1246 + 0 primary mapped (12.23% : N/A) | ||
0 + 0 paired in sequencing | ||
0 + 0 read1 | ||
0 + 0 read2 | ||
0 + 0 properly paired (N/A : N/A) | ||
0 + 0 with itself and mate mapped | ||
0 + 0 singletons (N/A : N/A) | ||
0 + 0 with mate mapped to a different chr | ||
0 + 0 with mate mapped to a different chr (mapQ>=5) |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,16 @@ | ||
1144 + 0 in total (QC-passed reads + QC-failed reads) | ||
1144 + 0 primary | ||
0 + 0 secondary | ||
0 + 0 supplementary | ||
0 + 0 duplicates | ||
0 + 0 primary duplicates | ||
1144 + 0 mapped (100.00% : N/A) | ||
1144 + 0 primary mapped (100.00% : N/A) | ||
0 + 0 paired in sequencing | ||
0 + 0 read1 | ||
0 + 0 read2 | ||
0 + 0 properly paired (N/A : N/A) | ||
0 + 0 with itself and mate mapped | ||
0 + 0 singletons (N/A : N/A) | ||
0 + 0 with mate mapped to a different chr | ||
0 + 0 with mate mapped to a different chr (mapQ>=5) |