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Modified READ.md file as suggested in #3
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aidaanva committed Feb 21, 2020
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# endorS.py
endorS.py calculates endogenous DNA from samtools flagstat files and print to screen

## Usage
## Usage
```bash
python endorS.py [-h] [--version] <samplesfile>.stats [<samplesfile>.stats]
```
Expand All @@ -22,4 +22,7 @@ optional arguments:
--output [OUTPUT], -o [OUTPUT]
specify a file format for an output file. Options: <json> for a MultiQC json output. Default:
none
--name [NAME], -n [NAME]
specify name for the output file. Default: extracted from the first samtools flagstat file provided
```

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