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Releases: aidaanva/endorS.py

Fix bug calculation percent duplicates and clonality

27 Mar 09:33
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Fixed bug in the calculation of percent of duplicates and clonality due to wrong assumption in the numbers stored in the samtools flagstats.

Bumped version in python code

10 Mar 09:40
529c28d
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Minor release fixing the version of endorspy

Fixed bug json production and READ.me

24 Feb 10:32
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This release includes the following changes:

  • Removed incorrect information in the usage in READ.me
  • Fixed bug for json production, now a json is being produced

Version 1.0.0

17 Feb 12:55
f691b39
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Added new flags and functionality to the original version to calculate different percent in target as well as clonality

Change license

11 Aug 11:17
d3000c1
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Change license from GPL to MIT for making it compatible for downstream tools

Bioconda release

02 Aug 19:46
16ccda0
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Made the program executable and prepared it for bioconda

minor update

16 Jul 10:07
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Solved issue #4 and added informative warnings for when no reads present in the fastq and when no reads mapped in the bam file. Additionally changed the json file to include a tag "id" and formating the decimal number to 2 for the multiQC report for nf-core/eager

minor update

27 Feb 06:34
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Consistent argument parsing with args.parse as suggested by @maxibor

endorS.py first release

08 Jan 14:53
6c6a7ad
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First release of endorS.py.
endorS.py calculates endogenous DNA from samtools flagstat files and prints to screen