Skip to content

Commit

Permalink
Release v0.5.0
Browse files Browse the repository at this point in the history
  • Loading branch information
althonos committed Jun 15, 2021
1 parent cefc244 commit cdbc101
Show file tree
Hide file tree
Showing 4 changed files with 16 additions and 3 deletions.
14 changes: 13 additions & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,19 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.


## [Unreleased]
[Unreleased]: https://github.com/althonos/pyrodigal/compare/v0.4.7...HEAD
[Unreleased]: https://github.com/althonos/pyrodigal/compare/v0.5.0...HEAD


## [v0.5.0] - 2021-06-15
[v0.5.0]: https://github.com/althonos/pyrodigal/compare/v0.4.7...v0.5.0

### Added
- `pyrodigal.TrainingInfo` class exposing variables obtained during training as an attribute to `Pyrodigal`, `Gene` and `Genes` instance.
- Support for passing objects implementing the buffer protocol to `Pyrodigal.find_genes` and `Pyrodigal.train` instead of requiring `str` sequences.

### Fixed
- Potential data race on training info in case a `Gene.translate` with a non-default translation table was being translated at the same time as a `Pyrodigal.find_genes` call.
- Spurious handling of Unicode strings causing potential issues on platform using a different base encoding.


## [v0.4.7] - 2021-04-09
Expand Down
1 change: 1 addition & 0 deletions MANIFEST.in
Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
include COPYING
include CHANGELOG.md
include CONTRIBUTING.md
include README.md

recursive-include pyrodigal/tests *.py *.txt
Expand Down
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# 🔥 Pyrodigal [![Stars](https://img.shields.io/github/stars/althonos/pyrodigal.svg?style=social&maxAge=3600&label=Star)](https://github.com/althonos/pyrodigal/stargazers)

*Python interface to [Prodigal](https://github.com/hyattpd/Prodigal/), an ORF
*Cython bindings and Python interface to [Prodigal](https://github.com/hyattpd/Prodigal/), an ORF
finder for genomes, progenomes and metagenomes.*

[![Actions](https://img.shields.io/github/workflow/status/althonos/pyrodigal/Test/master?logo=github&style=flat-square&maxAge=300)](https://github.com/althonos/pyrodigal/actions)
Expand Down
2 changes: 1 addition & 1 deletion pyrodigal/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,6 @@

__author__ = "Martin Larralde <[email protected]>"
__license__ = "GPLv3"
__version__ = "0.4.7"
__version__ = "0.5.0"

_Sequence.register(Genes)

0 comments on commit cdbc101

Please sign in to comment.