small changes

alxsimon · Jun 30, 2023 · a89cf7c · a89cf7c
1 parent 341fa39
commit a89cf7c
Show file tree

Hide file tree

Showing 4 changed files with 4 additions and 4 deletions.
diff --git a/workflow/envs/popgensim.yaml b/workflow/envs/popgensim.yaml
@@ -18,4 +18,4 @@ dependencies:
   - sgkit=0.6.0
   - pip
   - pip:
-    - git+https://github.com/alxsimon/py-admixcov.git@fb0e7da
+    - git+https://github.com/alxsimon/py-admixcov.git@v1.0.0
diff --git a/workflow/scripts/main_figure.py b/workflow/scripts/main_figure.py
@@ -49,7 +49,7 @@
 for x in [150, 130, 110, 50, 30, 10]:
 	_ = axs[k, l].annotate("", xy=(x, 0.1), xytext=(x, 0), arrowprops=dict(arrowstyle="->"))
 axs[k, l].set_xlim(times[0] + time_padding, times[-1] - time_padding)
-axs[k, l].set_ylabel("Mean ancestry")
+axs[k, l].set_ylabel("Mean ancestry proportion")
 axs[k, l].set_xlabel("Time (gen. BP)")
 axs[k, l].legend(loc="center left")
 axs[k, l].set_title('$A$', loc='left', fontdict={'fontweight': 'bold'})

diff --git a/workflow/scripts/plot_europe_uk.py b/workflow/scripts/plot_europe_uk.py
@@ -63,7 +63,7 @@
     _ = axs[k, l].axvspan(x1, x2, facecolor='grey', alpha=0.10)
 axs[k, l].set_xlim(times[0] + time_padding, times[-1] - time_padding)
 axs[k, l].set_ylim(top=1)
-axs[k, l].set_ylabel("Mean ancestry")
+axs[k, l].set_ylabel("Mean ancestry proportion")
 axs[k, l].set_xlabel("Time (years BP)")
 axs[k, l].legend(loc='upper center', bbox_to_anchor=(0.5, -0.15), ncol=3)
 axs[k, l].set_title("B", loc='left', fontdict={'fontweight': 'bold'})

diff --git a/workflow/scripts/plot_simple_scenarios.py b/workflow/scripts/plot_simple_scenarios.py
@@ -45,7 +45,7 @@
     ac.plot_ci_line(x=times, CI=Q_CIs[i], ax=axs[0,0], color=colors_oi[i], label=f"Pop{i}", marker='o')
 axs[k, l].set_xlim(times[0] + time_padding, times[-1] - time_padding)
 axs[k, l].set_ylim((0,1))
-axs[k, l].set_ylabel("Mean ancestry")
+axs[k, l].set_ylabel("Mean ancestry proportion")
 axs[k, l].set_xlabel("Time point")
 axs[k, l].legend(loc="upper right")
 axs[k, l].set_title('$A$', loc='left', fontdict={'fontweight': 'bold'})