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1. AllenInstitute/deep-neurographs AllenInstitute/deep-neurographs Public

   Deep-Neurographs is a Python module that utilizes machine learning to detect and correct false splits in a predicted neuron segmentation.

   Jupyter Notebook 3

2. AllenNeuralDynamics/segmentation-skeleton-metrics AllenNeuralDynamics/segmentation-skeleton-metrics Public

   A Python package for evaluating a predicted segmentation of neural arbors by using skeleton-based metrics. This tool detects topological mistakes (i.e. splits and merges) in a predicted segmentatio…

   Python 6

3. AllenNeuralDynamics/aind-exaspim-soma-detection AllenNeuralDynamics/aind-exaspim-soma-detection Public

   A Python package for detecting somas in ExaSPIM image datasets. Includes tools for image preprocessing and deep learning-based classification and training.

   Jupyter Notebook 1