antortjim / popgen2016 Public

R and Bash scripts used in the Zebra project at UCPH

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Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
PCA.R		PCA.R
README.md		README.md
ROH.R		ROH.R
ROH_final.R		ROH_final.R
admixture.R		admixture.R
correlation.R		correlation.R
diversity.R		diversity.R
fst.R		fst.R
functions.R		functions.R
heatmap.R		heatmap.R
inbreeding.R		inbreeding.R
map_functions.R		map_functions.R
maps.R		maps.R
plains_PCA_by_country.R		plains_PCA_by_country.R
plains_PCA_by_subspecies.R		plains_PCA_by_subspecies.R
plains_geo.R		plains_geo.R
plains_map.R		plains_map.R
plink_convert_ped_maps.sh		plink_convert_ped_maps.sh
plotting_funcs.R		plotting_funcs.R
read_data.R		read_data.R
run.sh		run.sh
species_PCA.R		species_PCA.R
variance.R		variance.R
zebra.png		zebra.png