S. aureus - A. baumannii Co-infections

Repository Structure

Bacterial_CoInfection_Script.py: This file is used to run the model simulations and to fit the model to the experimental data.
coInfectionModel_functions.py: The file contains all functions used in Bacterial_CoInfection_Script.py.
json_input_configs: This folder contains all json files that were used in the study. The json files include all parameters necessary to run the simulations and the parameter estimation.

python3 Bacterial_CoInfection_Script.py /json_input_configs/[json-file-name].json

This project is licensed under BSD - see the LICENSE file for details.

Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
json_input_configs		json_input_configs
.gitignore		.gitignore
Bacterial_CoInfection_Script.py		Bacterial_CoInfection_Script.py
LICENSE		LICENSE
README.md		README.md
coInfectionModel_functions.py		coInfectionModel_functions.py