Add iostream to forest (#2423) #795
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Test Matrix | |
| on: | |
| push: | |
| branches: [ master ] | |
| paths-ignore: 'doc/**' | |
| pull_request: | |
| branches: [ master ] | |
| paths-ignore: 'doc/**' | |
| jobs: | |
| testallconfigs: | |
| name: "CMake Matrix Test." | |
| runs-on: ${{ matrix.config.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - { | |
| name: "Linux Min GCC", | |
| os: "ubuntu-22.04", | |
| cc: "gcc-12", | |
| cxx: "g++-12", | |
| py: "3.9", | |
| cmake: "3.19.x", | |
| mpi: "ON", | |
| simd: "OFF" | |
| } | |
| - { | |
| name: "Linux Min Clang", | |
| os: "ubuntu-22.04", | |
| cc: "clang-13", | |
| cxx: "clang++-13", | |
| py: "3.9", | |
| cmake: "3.19.x", | |
| mpi: "ON", | |
| simd: "OFF" | |
| } | |
| - { | |
| name: "MacOS Min", | |
| os: "macos-13", | |
| cc: "clang", | |
| cxx: "clang++", | |
| py: "3.9", | |
| cmake: "3.19.x", | |
| mpi: "ON", | |
| simd: "OFF" | |
| } | |
| - { | |
| name: "Linux Max GCC", | |
| os: "ubuntu-24.04", | |
| cc: "gcc-14", | |
| cxx: "g++-14", | |
| py: "3.12", | |
| cmake: "3.22.x", | |
| mpi: "ON", | |
| simd: "OFF" | |
| } | |
| - { | |
| name: "Linux SIMD", | |
| os: "ubuntu-24.04", | |
| cc: "gcc-14", | |
| cxx: "g++-14", | |
| py: "3.12", | |
| cmake: "3.22.x", | |
| mpi: "OFF", | |
| simd: "ON" | |
| } | |
| - { | |
| name: "Linux Max Clang", | |
| os: "ubuntu-24.04", | |
| cc: "clang-18", | |
| cxx: "clang++-18", | |
| py: "3.12", | |
| cmake: "3.22.x", | |
| mpi: "ON", | |
| simd: "OFF" | |
| } | |
| - { | |
| name: "MacOS Max", | |
| os: "macos-14", | |
| cc: "clang", | |
| cxx: "clang++", | |
| py: "3.12", | |
| cmake: "3.22.x", | |
| mpi: "ON", | |
| simd: "OFF" | |
| } | |
| variant: [static, shared] | |
| env: | |
| CC: ${{ matrix.config.cc }} | |
| CXX: ${{ matrix.config.cxx }} | |
| # We set PYTHONPATH instead of installing arbor to avoid distribution/OS specific behaviour. | |
| PYTHONPATH: ${{ github.workspace }}/build/python | |
| # This is a workaround for the unfortunate interaction of MacOS and OpenMPI 4 | |
| # See https://github.com/open-mpi/ompi/issues/6518 | |
| OMPI_MCA_btl: "self,tcp" | |
| steps: | |
| - name: "Linux: get build dependencies" | |
| if: ${{ startsWith(matrix.config.os, 'ubuntu') }} | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libopenmpi-dev ninja-build ccache ${{ matrix.config.cc }} | |
| - name: "MacOS: get build dependencies" | |
| if: ${{ startsWith(matrix.config.os, 'macos') }} | |
| run: | | |
| brew install openmpi ninja ccache | |
| - name: Set up cmake | |
| uses: jwlawson/[email protected] | |
| with: | |
| cmake-version: ${{ matrix.config.cmake }} | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.config.py }} | |
| - name: Update pip | |
| run: python -m pip install --upgrade pip | |
| - name: Install Python packages | |
| run: pip install numpy sphinx svgwrite sphinx-rtd-theme mpi4py pandas seaborn pybind11-stubgen | |
| - name: Clone w/ submodules | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| # figure out vector extensions for ccache key | |
| - if: ${{ contains(matrix.config.os, 'macos') }} | |
| name: Check vector extensions | |
| # assume uniform hardware for macos | |
| run: | | |
| echo "VECTOR_EXTENSIONS=" >> $GITHUB_ENV | |
| - if: ${{ contains(matrix.config.os, 'ubuntu') }} | |
| name: Check vector extensions | |
| run: | | |
| HAS_AVX512F=$([[ $(lscpu | grep "avx512f" | wc -l) -eq 1 ]] && echo "_avx512f" || echo "") | |
| HAS_AVX2=$([[ $(lscpu | grep "avx2" | wc -l) -eq 1 ]] && echo "_avx2" || echo "") | |
| HAS_FMA=$([[ $(lscpu | grep "fma" | wc -l) -eq 1 ]] && echo "_fma" || echo "") | |
| HAS_AVX=$([[ $(lscpu | grep "avx" | wc -l) -eq 1 ]] && echo "_avx" || echo "") | |
| VECTOR_EXTENSIONS=${HAS_AVX512F}${HAS_AVX2}${HAS_FMA}${HAS_AVX} | |
| echo "VECTOR_EXTENSIONS=$VECTOR_EXTENSIONS" >> $GITHUB_ENV | |
| - name: Setup ccache | |
| uses: hendrikmuhs/[email protected] | |
| with: | |
| key: ${{ matrix.config.os }}-${{ matrix.config.cxx }}-${{ matrix.variant }}-${{ env.VECTOR_EXTENSIONS }} | |
| - name: Check config | |
| run: | | |
| $CC --version | |
| $CXX --version | |
| python --version | |
| mpic++ --show | |
| mpicc --show | |
| echo $PYTHONPATH | |
| - if: ${{ matrix.variant == 'static' }} | |
| name: Build arbor | |
| run: | | |
| export PATH="/usr/lib/ccache:/usr/local/opt/ccache/libexec:$PATH" | |
| mkdir build | |
| cd build | |
| cmake .. -GNinja -DCMAKE_CXX_COMPILER=$CXX -DCMAKE_C_COMPILER=$CC -DARB_WITH_PYTHON=ON -DARB_VECTORIZE=${{ matrix.config.simd }} -DPython3_EXECUTABLE=`which python` -DARB_WITH_MPI=${{ matrix.config.mpi }} -DARB_WITH_ASSERTIONS=ON -DARB_WITH_PROFILING=ON | |
| ninja -j4 tests examples pyarb | |
| cd - | |
| - if: ${{ matrix.variant == 'shared' }} | |
| name: Build arbor | |
| run: | | |
| export PATH="/usr/lib/ccache:/usr/local/opt/ccache/libexec:$PATH" | |
| mkdir build | |
| cd build | |
| cmake .. -GNinja -DCMAKE_CXX_COMPILER=$CXX -DCMAKE_C_COMPILER=$CC -DARB_WITH_PYTHON=ON -DARB_VECTORIZE=${{ matrix.config.simd }} -DPython3_EXECUTABLE=`which python` -DARB_WITH_MPI=${{ matrix.config.mpi }} -DARB_WITH_ASSERTIONS=ON -DBUILD_SHARED_LIBS=ON -DARB_WITH_PROFILING=ON | |
| ninja -j4 tests examples pyarb | |
| cd - | |
| - name: Install arbor | |
| run: | | |
| cd build | |
| sudo ninja install | |
| cd - | |
| - name: Run unit tests | |
| run: | | |
| build/bin/unit | |
| build/bin/unit-modcc | |
| - if: ${{ matrix.config.mpi == 'ON' }} | |
| name: Run MPI tests | |
| run: mpirun -n 4 -oversubscribe build/bin/unit-mpi | |
| - if: ${{ matrix.config.mpi == 'OFF' }} | |
| name: Run examples | |
| run: scripts/run_cpp_examples.sh | |
| - if: ${{ matrix.config.mpi == 'ON' }} | |
| name: Run examples with MPI | |
| run: scripts/run_cpp_examples.sh "mpirun -n 4 -oversubscribe" | |
| - name: Run python tests | |
| run: | | |
| python -m unittest discover -v -s python | |
| - if: ${{ matrix.config.mpi == 'ON' }} | |
| name: Run python+MPI tests | |
| run: mpirun -n 4 -oversubscribe python -m unittest discover -v -s python | |
| # - name: Run Python examples (plotting leads to time outs on macos, the step under testpip is enough) | |
| # run: scripts/run_python_examples.sh | |
| - name: Test executables | |
| run: ./scripts/test_executables.sh |